Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02516 ATGGAGCTTCACTACTATCTCTACATTCTCTCAATAAACCTATGCTTCTTGTTATTGTTACCTGAATCACTTTATTCCCAACAAGTGTACCTAAATGGAACAGTTTATGATTGCACTGATACCCCTTCTACACCAAAAGGGTACCTTTGCAATGGCCTCAAGAAATCATGCACTTCATTCATTGTTTTCAGGTCAAAACACCCTTATGATAACCCTGCAAGCATTGCATACCTTCTTGACTCTGAAGCATCAATCATAGCCTCAATCAACAAGCTCTCAAACAATGCAAGAATCCCTTCTAACAGACCCATCATTGTTCCTGTTTTCTGTTCATGTCATGGAAATATCTATAGCCATGATGCTCCTTACACTGTCAAGAACAATGACACATACTTTGAATTGGTAAAAACAACTTACCAAGGACTAACAACATGCCAAGCATTGATGGGGCAGAATTACTATCCCCCTAATGGACTTCCAATTGGTGCTGAACTCACAGTTCCTTTGTTATGTGCTTGTCCAACAGAAAATCAAACTTCAACAGGTGTCACTTCCTTATTGGTTGATTTGATCAACTATGGTGACACCTTGAAGTCCATAGGAGAATCTTATGGTGTTGATGAAGAAAGTATGTTAGAGGCTAATAAGCCACAAAGTAAAAATAGTAGCAGCTTCACCCTCTTGGCCTTGACACCTATCTTGGTTCCTCTAAGAGGAAAGAGTTGCAAAGAGGATCCTAATAGTTTCTATTGTAACTGTTCTAAGGAATTCCTTGCTGATGGAAGCTTAAAGGGGACTTATTGTGATGAGTCTGATGGTCAAAAATTCCCTGCCAAATTGGTTGTTTGCATTGGTGTTGGCATTGGTGTAGGCTTTCTTTGTTTCTTTTTCTTGGGTTATAAACTATACCAATACATACAGAAAAAAAGAGAAAGGATTCACAAGGAAAAGCTATTCAAACAGAATGGAGGCTACTTGTTACAAGAGAAAGTGTCATCATCACATGGAAATGGATCACAAAAGGTAATAATAAGGCTTTTCACAGCCGAGGAGCTTCAAAGAGCAACAGATAACTACAACTGGAGCAGGTTTcttggtcaaggtggatatggaaaagtctacaaaggaatgctaccagatggaaccatagtagctgttaagagatctaaggagattgagaggaaccagattgagactttcgtcaatgaagttgTCATTTTATCACAGATTAATCACAGGAACATTGTGAAGCTCTTGGGGTGCTGTCTTGAGACAGAAGCACCATTACTAGTCTATGAGTTCATTCCAAATGGAACACTTGCACAACATATTCATAGCAAACACCATGAATCATCTTCACCACTTTCATGGGATAGCCGGCTTCGAATTGCATGCGAGGAGAACAAAGTTTGTGATATCTTGGATCCCAAGGTATTGAAGGAAGCTAAGAAGGATGAGATTGTTGCAATTTCAAATCTTGCAATGAGGTGTTTGAGGCTAAATGGGAGAAAAAGGCCAACAATGAAAGAGGTTTCAGCTGAGTTGGAATCATTGAGGAAGGTACAAAGTTCCATGTTGGTTGATAACCATGATCATCATCATGATGAATCAACAAACAATGATGAAAAATTATTGCATAAACACAACAATAGTGTAGTACAAGAATATGCAGAGGAGAGCATTTTGCTGTCATTACAATTACAAATGGAGTCCTCATCCTTCTAA 1725 0.3594 MELHYYLYILSINLCFLLLLPESLYSQQVYLNGTVYDCTDTPSTPKGYLCNGLKKSCTSFIVFRSKHPYDNPASIAYLLDSEASIIASINKLSNNARIPSNRPIIVPVFCSCHGNIYSHDAPYTVKNNDTYFELVKTTYQGLTTCQALMGQNYYPPNGLPIGAELTVPLLCACPTENQTSTGVTSLLVDLINYGDTLKSIGESYGVDEESMLEANKPQSKNSSSFTLLALTPILVPLRGKSCKEDPNSFYCNCSKEFLADGSLKGTYCDESDGQKFPAKLVVCIGVGIGVGFLCFFFLGYKLYQYIQKKRERIHKEKLFKQNGGYLLQEKVSSSHGNGSQKVIIRLFTAEELQRATDNYNWSRFLGQGGYGKVYKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLAQHIHSKHHESSSPLSWDSRLRIACEENKVCDILDPKVLKEAKKDEIVAISNLAMRCLRLNGRKRPTMKEVSAELESLRKVQSSMLVDNHDHHHDESTNNDEKLLHKHNNSVVQEYAEESILLSLQLQMESSSF 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02516 574 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Adu04g02516 574 SUPERFAMILY Protein kinase-like (PK-like) 337 465 IPR011009 -
Adu04g02516 574 Pfam Protein tyrosine and serine/threonine kinase 362 453 IPR001245 GO:0004672|GO:0006468
Adu04g02516 574 ProSiteProfiles Protein kinase domain profile. 359 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02516 574 Pfam LysM domain 193 220 IPR018392 -
Adu04g02516 574 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 466 IPR045274 GO:0007166
Adu04g02516 574 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 466 546 IPR045274 GO:0007166
Adu04g02516 574 Gene3D Transferase(Phosphotransferase) domain 1 464 544 - -
Adu04g02516 574 PANTHER LYSM TYPE RECEPTOR KINASE 466 546 - -
Adu04g02516 574 PANTHER LYSM TYPE RECEPTOR KINASE 27 466 - -
Adu04g02516 574 Gene3D Phosphorylase Kinase; domain 1 326 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02516 Adu-Chr4 111413396 111415815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02516 464 519 Receptor kinase-like Gene Family AT1G16130 48.214 4.41e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Adu04g02516 PK_Tyr_Ser-Thr 2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02516 - - gmx:100795455 662.529