Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02505 ATGGAGATGGAGCTTGATTGGGATCTCCATGCGGTGGTTCGAGGCTGCTCCACCCTCACCTCTTCATCTTCATCTTCTTCTTCTTCCTCATCCTCTTCTGGGTTCGGTTACTTTTACTCTCAAGCTTCTCCTTCTTCTGTCCTTGACACTGAAGACCAACACCAACAACAAGGAATTACCAACAATGTTATGTCTTTTTCTGCTGCTTCATATTCATACCCCTTTGGACCAAGGACCGCCATTGAAGAGTTGCATGAGCTTTGCAAGCCTTTCTTTACAAAATCACTCCCTCAACAACAACAATCATTGCAAGCTTCTTCTCCTTTGTCTTCATTCTCTGTAGCACCACCACCACCACCACCAAAACCTGTTCATGCACAAGAGAAGCAACAGAGAAGCAACACCAACAAGCATCCTCACCCTGGTGGTGATTCTGTCAACACCCCAAGATCTAAAAGAAGGAAGAACCAGCTCAAGAGAGTTTGTCAGGTACCAGTTGAGAATCTCTCATCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATAAAGGGGTCACCATATCCAAGGGGATACTATAGATGTAGCAGCTCAAAGGGATGTTTGGCAAGGAAACAAGTTGAAAGGAACAGAACGGATCCAACAATGTTCATAGTAACCTACACAGCAGAACACAACCACCCTGCTCCAACTCACAGGAACTCCCTTGCCGGATCGACGCGCCAAAAGCCGTTGACACCTCAGGCAGCTGCGGCCACCACCACCAACGGTGGAGAATCTGATGAGAAGGCCTTGACACCAACGAAATCGGCTTCGCCTGATATCTCAGTTGCGGAAGAAGAGGCTTTACCACAACATTGTGAAAAGTCATCAGTGAGCAGAGAAGAGAAGGAAGAGGATTTGGCTGATGATGATGATGATGAGTTTGGTTTATCTGATATGGTGATACCTGATGATTTCTTTGATAGTTTTGATGAACTGAAAGAGATCACTGGTATTGATGATGATGGAATTAGAGGAGATAATTTCTTTGTTGATCCCTTTTCAGCCATTGCTATGCCTTCTTGGGTTGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1110 0.4577 MEMELDWDLHAVVRGCSTLTSSSSSSSSSSSSSGFGYFYSQASPSSVLDTEDQHQQQGITNNVMSFSAASYSYPFGPRTAIEELHELCKPFFTKSLPQQQQSLQASSPLSSFSVAPPPPPPKPVHAQEKQQRSNTNKHPHPGGDSVNTPRSKRRKNQLKRVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRTDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLTPQAAAATTTNGGESDEKALTPTKSASPDISVAEEEALPQHCEKSSVSREEKEEDLADDDDDEFGLSDMVIPDDFFDSFDELKEITGIDDDGIRGDNFFVDPFSAIAMPSWVANSAATAAGGS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02505 369 SUPERFAMILY WRKY DNA-binding domain 168 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02505 369 Gene3D WRKY domain 154 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02505 369 MobiDBLite consensus disorder prediction 228 274 - -
Adu04g02505 369 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 368 IPR044810 GO:0003700
Adu04g02505 369 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 368 - -
Adu04g02505 369 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02505 369 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02505 369 Pfam WRKY DNA -binding domain 172 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02505 369 MobiDBLite consensus disorder prediction 99 162 - -
Adu04g02505 369 MobiDBLite consensus disorder prediction 227 310 - -
Adu04g02505 369 MobiDBLite consensus disorder prediction 282 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02505 Adu-Chr4 111275460 111277935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02505 3 368 WRKY Transcription Factor Family AT4G01250 44.444 2.49e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g02505 WRKY 3.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02505 K13425 - gmx:100170675 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02505 04 111275460 111277935 Adu05g03442 05 106848085 106851214 ECH
Adu04g02505 04 111275460 111277935 Adu04g02505 04 111275460 111277935 ECH
Adu02g00245 02 2757934 2759567 Adu04g02505 04 111275460 111277935 ECH
Adu09g00311 09 3291242 3298122 Adu04g02505 04 111275460 111277935 ECH
Adu04g02505 04 111275460 111277935 Adu02g00245 02 2757934 2759567 PCT