Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02496 ATGTCAGTCACACTATGTCTAGCAACGGTGCAGAGTCAATGGTCATCCTCAAACCGAAAACCTGCTTCCTATCCTTTGGATGTGGTGGTGACATATTGCCAAGTAAATCATCAACCTACTCCCACATGGGTGTCCATGCTACTGTTGGAAGTCTCTGGTACAATCCCTAATCGGTTCACCCTCAGTGCACATACCAAGATAGTAAATAACATCTTGAAGCGTAATATTGATTTCACCCAATGGAAGGTGAAAACTGTAGTCCTCATCGTATTTACCCTCTTTCTTCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCGCCGCCGAACCGTTGCCGGAAAATATTCATCCGCTGGAGCACCACCAGCCAAGGAGATCCAGGAGATAGTCCACCTCCCTGGACCACACATGCTCCGGCAGCCTCAGGCGCCGGCGCCGGTGCCAGAGATTCACGTTGACTTCGGAAAAGTGGAGCATCGTGTGGTGGTACACTCTGATAACAACAACAACAGCAACAATAGAGGAGTGTCTAGTGGTGAAAGTAAAGGAACTGTTAGTGGCTGTGAAACGACATCGTCGTTTGGGAGTGGGAGTGTCGTTTTGGGGGTTGGTGGTGGTGGTGTTGGTGTGGGACCTGAGGTTTCTCATCTTGGTTGGGGAAGATGGTACACTTTGAGAGAACTTGAAGCTGCTACTAATGGATTGTGTGAAGAGAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATTCTGGCGTTCTAAGTGATGGTACCAAAGTTGCTGTCAAGAATCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTTCGACACAAAAATCTTGTTAGGTTACTTGGCTATTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTGAACAATGGGAATCTAGAACAATGGCTGCATGGGGATGTTGGACCTTTAAGTCCTTTGACATGGGATATACGCATGAACATCATCTTGGGAACTGCAAGAGGATTGGCATATCTTCATGAAGGTCTTGAACCAAAGGTTGTCCACCGGGATGTGAAATCGAGTAATATACTCATTGATCGCCAATGGAACTCTAAGGTTTCTGATTTCGGGCTCGCTAAACTTTTGTGTTCTGAGAATAGCTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCCTGCACCGGAATGTTGACCGAAAAGAGTGACGTTTATAGCTTCGGGATACTCATCATGGAGATAATTACCGGGAGGAGTCCTGTCGATTATAGTAGACCACAAGGAGAGGTTAACTTAATAGATTGGTTGAAGACTATGGTTGGGAATAGAAAAGCTGAAGAGGTAGTTGATCCTAAGCTCCCTGAGATGCCAACCTCCAAGGCCCTTAAACGTGCTATATTGATTGCCCTTCGATGTGTTGACCCTGACGCGACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGATGATCTGTTATTCCAACATGAACGAAAAACTGAGGGAGAATCTTCGCGTTCGCAACGACAAGAGCGCAAGGACTCAGATTTAGATAAGAGGATACCAGATGGAGGGATCACTGATCAAAGTGAAGATGATACTAGTAGAAATCACCAGCAGCATACTAGGTGGAGATGA 1695 0.4649 MSVTLCLATVQSQWSSSNRKPASYPLDVVVTYCQVNHQPTPTWVSMLLLEVSGTIPNRFTLSAHTKIVNNILKRNIDFTQWKVKTVVLIVFTLFLLSLCLTSRRHRRRRTVAGKYSSAGAPPAKEIQEIVHLPGPHMLRQPQAPAPVPEIHVDFGKVEHRVVVHSDNNNNSNNRGVSSGESKGTVSGCETTSSFGSGSVVLGVGGGGVGVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYSGVLSDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLEQWLHGDVGPLSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKAEEVVDPKLPEMPTSKALKRAILIALRCVDPDATKRPKMGHVIHMLEADDLLFQHERKTEGESSRSQRQERKDSDLDKRIPDGGITDQSEDDTSRNHQQHTRWR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02496 564 SMART serkin_6 235 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02496 564 ProSiteProfiles Protein kinase domain profile. 235 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02496 564 Pfam Protein kinase domain 238 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02496 564 PANTHER OS01G0323000 PROTEIN 83 554 - -
Adu04g02496 564 CDD STKc_IRAK 241 507 - -
Adu04g02496 564 Gene3D Phosphorylase Kinase; domain 1 219 310 - -
Adu04g02496 564 ProSitePatterns Protein kinases ATP-binding region signature. 241 263 IPR017441 GO:0005524
Adu04g02496 564 MobiDBLite consensus disorder prediction 165 189 - -
Adu04g02496 564 Gene3D Transferase(Phosphotransferase) domain 1 311 524 - -
Adu04g02496 564 SUPERFAMILY Protein kinase-like (PK-like) 214 507 IPR011009 -
Adu04g02496 564 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 83 554 - -
Adu04g02496 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Adu04g02496 564 MobiDBLite consensus disorder prediction 517 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02496 Adu-Chr4 110912903 110921349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02496 222 563 Trihelix Transcription Factor Family AT5G38560 45.042 2.43e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu04g02496 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02496 - - gmx:100800724 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02496 04 110912903 110921349 Adu02g00234 02 2612928 2615763 PCT