Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02491 ATGGAAGATTACGCTGCCAGCAGCGATGATGAATACCGTTACTCCGATCCGGAGGACTCCGTCGACGCCTTCGATAACGATGATAACGATTATCAATTAGTCTCTTCCAAGGGTCCCTCTACTCAGGTGATTACGAAGGAGTCATTGCTAGGTGCACAGAAGGAGGATTTGCGCAAGGTGATGGACATGCTATCGGTGAGGGAGCAACATGCACGTACCCTGCTTATTTTTCATCGTTGGGATGTGGAGAAGTTGTTTGCCGTGTATGTAGATAGGGGAAAACATTTTCTGTTTTCTGAAGCTGGTGTTACAGTGGATGAACATCGCGACTCTAATTCATCAGCTGCTCCTTTGACAATAATGTGCGAAATTTGCATAGAGGATGTTCCTAGTGATGAAACAACAAAAATGGACTGCGGTCACTGTTTTTGCAACGGCTGTTGGACAGAGCATTTTATTGTCAAGATAAATGAGGGTCAAAGTAAGCGCATCAGATGCATGGCACACAAATGTTATTCCATTTGTGATGAAGCTGTTGTCATAACTCTTCTCAGCAAAAAGCACCCTGATATGGCAGAGAAATATGAACGCTTTCTTCTTGAATCCTATATTGAAGACAACAAGAGAGTTAAATGGTGCCCTAGTGCGCCTCATTGTGGGAATGCAATACGCGTTGAGGACGATGAATTATTTGAGGTAGAATGTTCATGTGGTTTACAGTTTTGCTTTAGTTGCTTGTCAGAAGCACATTCCCCATGCTCATGTTTGATGTGGGAGCTTTGGGCCAAAAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAACAGTTCATACGAAGCCTTGTCCAAAGTGCCACAAACCGGTCGAGAAAAATGGTGGTTGTAACTTGGTTAGCTGTATCTGTGGTCAAGCTTTTTGTTGGTTGTGTGGTGGAGCTACCGGTCGAGAGCATACCTTGTCAAGCATTGCTGCTCATAGCTGTGGTCGCTATGAAGAGCAAGAAAAAACAGCTGAAAGGGCAAAGAGGGATCTGTATCGTTATATGCATTATCATAATCGTTACAAAGCTCACACAGATTCCTTTAAGCTTGAGAGTAAACTGAAGGAGACTATACAAAAGAAGATTGCTGTCTCAGAAGAAAAACATTCTACGCTAAGGGATTATAGTTGGGTAAATAATGGGCTCTCTAGACTTTTCAGATCTAGGCGTGTCCTATCATATTCATATGCATTTGCGTTTTACATGTTTGGTGACGAACTATTTAAGGAAGAAATGACAGAAGCTCAAAGGGAAATAAAACAGAATTTGTTTGAGGATCAGCAGCAGCAGCTTGAGGCAAACGTTGAAAAGCTCTCCAAAATTTTGGAGGAACGTTTTCAAACTTTTAAATATGATAAAGTCATGGAGATAAGGATGCAGATAATCAATCTGACCACTATCATTGACAAACTTTGTCAAAAAATGTATGAGTGTATTGAGAATGATTTACTGGGTTCTCTCCATATTGGTGTTCACAACATTGCTCCATACAAGTCAAAGGGGATCGACAAGGCATCAGAACTTTCAGTTCACAACATTGCTCTATAA 1590 0.4132 MEDYAASSDDEYRYSDPEDSVDAFDNDDNDYQLVSSKGPSTQVITKESLLGAQKEDLRKVMDMLSVREQHARTLLIFHRWDVEKLFAVYVDRGKHFLFSEAGVTVDEHRDSNSSAAPLTIMCEICIEDVPSDETTKMDCGHCFCNGCWTEHFIVKINEGQSKRIRCMAHKCYSICDEAVVITLLSKKHPDMAEKYERFLLESYIEDNKRVKWCPSAPHCGNAIRVEDDELFEVECSCGLQFCFSCLSEAHSPCSCLMWELWAKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTLSSIAAHSCGRYEEQEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQKKIAVSEEKHSTLRDYSWVNNGLSRLFRSRRVLSYSYAFAFYMFGDELFKEEMTEAQREIKQNLFEDQQQQLEANVEKLSKILEERFQTFKYDKVMEIRMQIINLTTIIDKLCQKMYECIENDLLGSLHIGVHNIAPYKSKGIDKASELSVHNIAL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02491 529 ProSiteProfiles Zinc finger RING-type profile. 122 170 IPR001841 -
Adu04g02491 529 SUPERFAMILY RING/U-box 193 261 - -
Adu04g02491 529 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 207 IPR013083 -
Adu04g02491 529 SUPERFAMILY RING/U-box 120 205 - -
Adu04g02491 529 Pfam Ariadne domain 332 525 IPR045840 -
Adu04g02491 529 ProSiteProfiles TRIAD supradomain profile. 118 332 IPR044066 -
Adu04g02491 529 Pfam IBR domain, a half RING-finger domain 193 255 IPR002867 -
Adu04g02491 529 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 503 - -
Adu04g02491 529 MobiDBLite consensus disorder prediction 1 27 - -
Adu04g02491 529 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 503 IPR031127 GO:0004842|GO:0016567
Adu04g02491 529 Gene3D - 251 498 - -
Adu04g02491 529 SUPERFAMILY RING/U-box 274 315 - -
Adu04g02491 529 SMART ibrneu5 263 328 IPR002867 -
Adu04g02491 529 SMART ibrneu5 193 255 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02491 Adu-Chr4 110848589 110850178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02491 61 522 ARIADNE family AT2G16090 72.258 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02491 K11968 - gmx:100783343 935.25