Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02474 ATGCCTGAGAACGAGACAAAAAGCTCTTGTCTGCTGAATTTGATATTGAGTGATCAGAACCATTGTCTGGAGACTCAGTATGAGTTGAACATTCTGAAATGTGAGGAGGAGCAAAGGAAGGAAGAAAATCTGAAACCTCTTAGGGTTCATATGGAGCACGCACTTGATAATGGAGGCAGCAATGGTGGTTTCGACAGTGGCACAAGAGAAGTGCGACCACCGGATCTTGAAGTGGATGATAAAATGGAAGAAAGAGTATTCTTTGATGAGATGATAGAAGAGTTAGATGATACAGAGGAATTTCAAGGAATGTATCAAGATGAAATTGAGCAAGAAGCTGTGAATTCTGAGGATTTAGGGGAGCATGAATTTCAAGAAATGTTTGATGGGAACGATTTTTCACATGAGGTGGATGAATTATATCGAATAGAAGATATTGAAAATATTGCCATGGTTAATTTTCTGAACATAGGTGCTCATGAGATGGAATGCTTTCATTTTCCTAATCTTCAGATAGCATTTGATTTCTATAACCATTATGCGAAATCTGTTGGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTGTTTGTGTGCTCTCGTGAGGGATTTAGACCAGAAAAATATTATAATATGGAAAACAGAAAAAGGGAGCCAAAATCTGAGACTCGTTGTGGTTGTCTGGCTAGGTTTGTAGTTCGTTTTGTAGCTTACACTGGAAGATGGCATGTGGCTTTGTTTGTTGAATCGCACAATCATGATTGCCTTGATCCTAGGTTAGTTGGTTTTCTTCCTACACATAGAAAAATGGCAGAAGCTGATGCTAGTCAAATGAACAACATGAAGGATGCAGGCATTAGCACACCCCATATATATGCTATGTTAGCTAATCAAGCAAGTGGTTATGAAAATGTTAATTATACCTTAAGGGATATGTATAATGAGATTGCTAGGCGAAGGCGTCATGTCCTGGGTGATGCAAGAGCGGCATTGCGATACCTCAAAAACCAGAAAGCTGAAGATACAAGCCTCTATTATGAGCACATAGTTGATGCTAAAGGGCATTTTAAGCGGTGTCTTACCTACCTAAGATATAAGGAGGTTGAAGCTGACTATGTTTCCATATCTGGTCTTCCGGTACTTAAAACAGCATTAGAACCTCTGGAAAGGTCTGCATCAAATTTCTATACACGAGAGTTATTTTTTATATTTCGACCAATGCTTGTTAGGGCTGCAAGAATGAAGGTTGTGCAAGATGTGGCATTTGATTCATTTGTACTTTATACAATATCTAAATATGGAAGTCTAAATAGTTCATGGGAGGTGTCTGTGGATAATGAAAGGACGAAATTTAATTGTTCATGCTTAAGGATGGATTCTTTTGGAATTCCGTGTGAGCATATAGTTTGTGTGCTGGTGTTTCTTAACATCCTTGAGCTGCCAAAGTCTCTTGTGTTGACAAGATGGTCGAAGAATGCCAAGACAAGCACTTTTGATTCAAGTGGCGTTACTTGGGAGTCTATAATATTGAGTCAATATGGATGCTTGATGGATTGGTGTCGGCAGCTGTCCTATATCGCTAGTCGAAGGCAGGAGAGATTCCACCTTGTTTGA 1641 0.39 MPENETKSSCLLNLILSDQNHCLETQYELNILKCEEEQRKEENLKPLRVHMEHALDNGGSNGGFDSGTREVRPPDLEVDDKMEERVFFDEMIEELDDTEEFQGMYQDEIEQEAVNSEDLGEHEFQEMFDGNDFSHEVDELYRIEDIENIAMVNFLNIGAHEMECFHFPNLQIAFDFYNHYAKSVGFGARKSKTWKNSKGEYVKQLFVCSREGFRPEKYYNMENRKREPKSETRCGCLARFVVRFVAYTGRWHVALFVESHNHDCLDPRLVGFLPTHRKMAEADASQMNNMKDAGISTPHIYAMLANQASGYENVNYTLRDMYNEIARRRRHVLGDARAALRYLKNQKAEDTSLYYEHIVDAKGHFKRCLTYLRYKEVEADYVSISGLPVLKTALEPLERSASNFYTRELFFIFRPMLVRAARMKVVQDVAFDSFVLYTISKYGSLNSSWEVSVDNERTKFNCSCLRMDSFGIPCEHIVCVLVFLNILELPKSLVLTRWSKNAKTSTFDSSGVTWESIILSQYGCLMDWCRQLSYIASRRQERFHLV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02474 546 Pfam FAR1 DNA-binding domain 175 265 IPR004330 -
Adu04g02474 546 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 161 356 - -
Adu04g02474 546 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 373 506 - -
Adu04g02474 546 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 161 356 IPR031052 GO:0006355
Adu04g02474 546 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 373 506 IPR031052 GO:0006355
Adu04g02474 546 SMART 26again6 460 487 IPR006564 GO:0008270
Adu04g02474 546 Pfam SWIM zinc finger 461 481 IPR007527 GO:0008270
Adu04g02474 546 ProSiteProfiles Zinc finger SWIM-type profile. 449 485 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02474 Adu-Chr4 110201412 110205273 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g02474 FAR1 6.3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02474 - - adu:110280242 641.343