Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02466 ATGATGTGTAGTGGTGAGCCTTTGGATTTGTATAAGCTATTCATGGTGGTGAAGGAGAAAGGTGGCTATGATGCTGTTTGTAAGAATATGCTGTGGGATTTGGTTGCGGAAGAATATGGTTTAGGTTTAAATGTTGGTTCATCTATTGAACTTGTTTATAGTAAGCACTTGAGTACACTAGAGACATGGCTGAAGAATGTTGCTGATAGTAAGTTCCCTGAGTGTGGTTTAATGGATGATAGGGTTAGTTTTGGTAAGAAGTTGATGGAGGTGCAGGCTGATTTCTTGTTAGATGTTTATAGCGAGGAAGGTGCAGGGGATAAAATTAAGACAGTATGTGATTTCGCAGATGGAAGGAAGTTGTGTGGAACTAATAGGGTTAGGGGATTGAATCCTGAGCTCAGCGGTGCAAAGAAAATTGTTGATTTGAATGCACTGGACCATAAGATAAATGGGCCTAGTATTGGAAGCTTTTGCAGCAATAACTTTTCAAATAATTCAAGTGATATACAGAACCATTTGAATGAAATTAAGACATCAACAGTGGACATATCTGATGAAGCAAACATAATGCCTACATTGTCGGAAGAAGGTGATAGTTGTGATAAAAATGATGGTCATGATGACGACGATGACGACGATGATGATGTGATGGTATTGGATCCATCCACTGTTAATAAAGAGAGCTTTGGTAGAAAGAGGAAGAGAGAGTCTATGTCTGAAATGCTAAGCTGGCTTACTGGTATTGCTAAGAATCCTTGTGATCCTGCAGTTGGTTCAATGCCTGAAAAGTCAAAGTGGAAGTCTTATGGTAGTGAGGAGATCTGGAAGCAGGTTTTGCTGTTTCGGCAAGCCACCTATTTTAGCAGTGATCACGTCAGTTGGCAGAGTCAGAAGATGCATCCTTGCATGTATGATGATCAGGTTGGGGCAAACTACAACCTTAGAGAGAGGTTGAAATCTGACAAGAATTTAACTTGTGGTGTCTCTTCAAATATGGGAGGAATACAGGGAGGTTCCGAGAGAAACCCAAGTCCTCATTCAGAAGTGGAGAAACTGTTACTTGACCAATGTAGCATGGTGCCCATTCCTGTTGGGCCATCCCATCAAGCTGAAGTGCCTGAATGGACTGGTGTGGCAATTGAAAGTGATTCCAAGTGGTTGGGAAGCCAAATATGGCCATCAGCAGAGATAAAGTCCAAAGTCATAGAAAGAGATCCTATTGGAGCAGGAAGGAAAGATTCATGTGGCTGTGAAGTACAAGGTTCTGTTGAGTGTGTCCGGTTCCACATTGCTCAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCTTTTTATCTGTGGAATTTACACAAGACAGGCGAAGATGTTAGGCGATTGTGGACAGAAGACGATGAGAAGAAGTTCAAGGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAAATGTTTTTGGGATCAAATTTTCAAATCATTTCCTACAAAGAGCAGGGAAGATTTAGTAAGTTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAAAATAGGAATACTCCGGATGACATTGACAGTGACGATGATGAATCAGAATATGGTCCATTGAAGAATGCTTTTGGACATCAAACACATAGGTCGCGCAACATCACCTTATTGTCTCCCAAAAAGCCCAAGAAAACGGAACATAGCAAGTGA 1701 0.4115 MMCSGEPLDLYKLFMVVKEKGGYDAVCKNMLWDLVAEEYGLGLNVGSSIELVYSKHLSTLETWLKNVADSKFPECGLMDDRVSFGKKLMEVQADFLLDVYSEEGAGDKIKTVCDFADGRKLCGTNRVRGLNPELSGAKKIVDLNALDHKINGPSIGSFCSNNFSNNSSDIQNHLNEIKTSTVDISDEANIMPTLSEEGDSCDKNDGHDDDDDDDDDVMVLDPSTVNKESFGRKRKRESMSEMLSWLTGIAKNPCDPAVGSMPEKSKWKSYGSEEIWKQVLLFRQATYFSSDHVSWQSQKMHPCMYDDQVGANYNLRERLKSDKNLTCGVSSNMGGIQGGSERNPSPHSEVEKLLLDQCSMVPIPVGPSHQAEVPEWTGVAIESDSKWLGSQIWPSAEIKSKVIERDPIGAGRKDSCGCEVQGSVECVRFHIAQKRAKVKLELGVAFYLWNLHKTGEDVRRLWTEDDEKKFKDVVKSNPPSLEKCFWDQIFKSFPTKSREDLVSYYFNVFILQRRGYQNRNTPDDIDSDDDESEYGPLKNAFGHQTHRSRNITLLSPKKPKKTEHSK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02466 566 SUPERFAMILY ARID-like 3 73 IPR036431 GO:0003677
Adu04g02466 566 SMART bright_3 2 66 IPR001606 GO:0003677
Adu04g02466 566 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Adu04g02466 566 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 562 - -
Adu04g02466 566 MobiDBLite consensus disorder prediction 193 216 - -
Adu04g02466 566 SMART ELM2_2 363 413 IPR000949 -
Adu04g02466 566 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 562 - -
Adu04g02466 566 SMART sant 458 511 IPR001005 -
Adu04g02466 566 CDD ARID 4 61 - -
Adu04g02466 566 Pfam Myb-like DNA-binding domain 461 508 IPR001005 -
Adu04g02466 566 MobiDBLite consensus disorder prediction 520 566 - -
Adu04g02466 566 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Adu04g02466 566 CDD SANT 462 509 IPR001005 -
Adu04g02466 566 Gene3D - 1 73 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02466 Adu-Chr4 110021060 110025458 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Adu04g02466 ARID 8.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02466 - - adu:107485899 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02466 04 110021060 110025458 Adu04g02466 04 110021060 110025458 ECH
Adu04g02466 04 110021060 110025458 Adu02g00052 02 644602 647189 PCT