Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02441 ATGAATCCAGAGGAAGCTGCACAAATTCCCAGAAGAACTACAAGGTCTTTAGCTTCATCTTCTGCGTCGACTTCTAATAATGCATCTTCTGCAAAAGTAAATAGCCTTGAACCTCTAACAATCAATGACCTTTTAGTTGGAGGAGACCCTATTAGCCTAGATGAATTGTTTTCTAATTTCCCTGGTAGAAGTAGCCAGATTCTCGAGATTGTAAGTCTTTTGGGGCCATTGAACACTCCAATGCTTCCTTTGTTTGTGTATGGTGGTGCTTCCACTGGAAAAACCAGTATCATTCTTCAATTATTCCGGCATCTCAACAGGCCTCTTGTTTATTCTAGCTGCAGGACTAGTTATAATCAGCGTATCTTGTTTGAATCTATTCTAAATCAGTTGCATCTCCATAGAAAAAGTTCTGCCAATGGCTATTCAAATGCAAAGCGCTGTGAGAGACCATCGGATTTTATTAATTTTCTTAGGGAAGCATTGACCGATGCCATAAACAATCTGAAGGAGAAGTCGGCGAAGTTGATATCAGGCAAGACAATGGCACAAGGGGGGATTGGAAACATGATCTACTTGGTATTTGACAATTTTCAGCTTGTTAGAGAGTGGGATAAGAGCTCTACTTTATTACCCTTTCTGTTTAATCTCTATGATCTGCTGAAGATTCCTGAGGTGGGTCTAATATTTATCAGCAATACTTCTCCAGATACCTTTTACTCTTCTAACATGGGTTATGTGGAGCCTATCCCTGTATACTTTCCGGATTACACAGATGCTGATATTCGCAAAATATTGTCGAGAAACCAAGCAGACTCGAAGCTGTATTCTTCATTCTTGGATGTGGCTTTAAGGTCTTTCTTTAGGGTTACTAGGCAGGTTGATGAATTGTCCACTGCCTTCAAACCACTATATGAAAAATATTGTGAACCTTTAAGCGATAAAAGAGTCTTTCCTAATGGAGACAAAGACAAAGACATGAAGAGAAAGTTATTTAGTCATATCAATCCTCACATCACATCCTCTCTGAATGAGATATTTAAGGTTTCATCTCATCCTTCAGTTGAAGTTGAGAACTCCAAAGAGGCAAATCTGAAGGTGAATCAAAGGAAACTGGAGCGACGTGAAGAAATTGCCAAGCTAGATTTTCACATGTCGACTAGTGCAAAGTATCTTCTTATTTCAGCATTTCTTGCTTCCCGAAATCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGAGGTTCTCATAATCGAAAGCGAAAGAGGAAACCCTCTGAGAAGGTGCCTGAAAGAAAGGAAAGTTTAGAAGAGGAGTTACTAATGAAAGGACCTGGAAGTTTCCCACTGGAGAGGTTGTTAGCCATCTTTCAGTGTATTGTATCGGTCGCAGAAGATTCGTCGGATGAGGACAAACAAAGCGGCGAGCTGATGTCTGATGTTCTGTTGCAGCTATCCAGTCTCTGCAATGCTAAATTTATATTTAAAGGAAGAAGCTGTCCAATTGAAGGCTCAGTTCGGTATCGGTCAACTGTATCAGAAGACTTGGCTTTGAAGGTTGCAAGGAGCCTCAAGTTCCCTTTATCAAGTTATTTGGTCTCTCTGAATTTAGGAGGTGCTGCTGAATTATTCACCATTCTACACTTTGGCAAGATTATGCAGCCGTATATCTGGCTTCAGACACCAGATGGTGCAATACAACAAGTGGAACAGGTAATTGCAATGTTTTGCCCTTTTATTTGTCAAGAAGTAATACAAAAAGGCACGGGATCTTCAAAGAACTGTGCAATATGTCTTCCTCAACGAGTCACCCCTACTATTTTGAGCTTAATACTTGATTATTGCCGATTTCATCAAGTACCAGGTCGCTCAAACAAGGAGCGGAAGTCTTATGATGAGAAATTCATGCGGATGGACACGAAGCAGTTATGCGAGTTGACATCTGCTGCAGACAGCCTTCAGTTGAAACCATTGGTTGATCTTACCAGCCGTACACTTGCTCGAGTAATTGAAGGAAAATCCCCTGAGGAAATACGCGGCATATTTAATTTGCCAGATGATCTTACAGAGGAAGAGAAATTGGAGCCCTTGAAAAACACAACTGCTGATCCGAGGATCAGGCTTTTGAACCGTTTGTATGCTAAGAAAAGGAAAGAGCTGAAGGAGCGTGAGAGGCTAAAGAATGTTGAAGTTGAAGAAGAGCATGTGGATGATCGTTCAGTCGATGACCTTTTGTCTTTTATTAATGGAAATGATGCAGATCCAAAGGAGATGAAAAATTCTAAGAATAAAAAGAAAAACCGAAGAAGAAAAGAGCAACAGATGAGCTCTTCTTTGAAGGAAGCTTCTGAACTGAACAATAAGGAGATAAATGGTCATAATATCAGACCCCAAACTGATGGAGCTAATGGAGTTTCCGAGGCCTCACAGTCTAATACAGAAGACAGCACTTTTGTTCCTAGAGAGTTTGATGATGGAGATATAGATGAGGAGATCGATCCTGCATTACAGGAAAAACTTGACAGGGAAGTGGAAGATTTCGCTCGCATATTAAATTCTGACTGGCCAGAGAGGATGCAGGAACTGTTGTCGTTGGGGCAAGAAAGAAAAGCAATGCCTTTTACATCCAACGGAAACAGTTTTTTAAGACGAAATGCTTATTTTGGTCAGCTAGAGCCAAGGTTGTCAAATATCCGCTATATCGGCGCAATAGCGCTATTGCATGGCGGAAATTTAACAAAACACAATGAGCCGCAATCCGCTATTGATGACCTTGCTTAG 2784 0.4077 MNPEEAAQIPRRTTRSLASSSASTSNNASSAKVNSLEPLTINDLLVGGDPISLDELFSNFPGRSSQILEIVSLLGPLNTPMLPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTSYNQRILFESILNQLHLHRKSSANGYSNAKRCERPSDFINFLREALTDAINNLKEKSAKLISGKTMAQGGIGNMIYLVFDNFQLVREWDKSSTLLPFLFNLYDLLKIPEVGLIFISNTSPDTFYSSNMGYVEPIPVYFPDYTDADIRKILSRNQADSKLYSSFLDVALRSFFRVTRQVDELSTAFKPLYEKYCEPLSDKRVFPNGDKDKDMKRKLFSHINPHITSSLNEIFKVSSHPSVEVENSKEANLKVNQRKLERREEIAKLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSHNRKRKRKPSEKVPERKESLEEELLMKGPGSFPLERLLAIFQCIVSVAEDSSDEDKQSGELMSDVLLQLSSLCNAKFIFKGRSCPIEGSVRYRSTVSEDLALKVARSLKFPLSSYLVSLNLGGAAELFTILHFGKIMQPYIWLQTPDGAIQQVEQVIAMFCPFICQEVIQKGTGSSKNCAICLPQRVTPTILSLILDYCRFHQVPGRSNKERKSYDEKFMRMDTKQLCELTSAADSLQLKPLVDLTSRTLARVIEGKSPEEIRGIFNLPDDLTEEEKLEPLKNTTADPRIRLLNRLYAKKRKELKERERLKNVEVEEEHVDDRSVDDLLSFINGNDADPKEMKNSKNKKKNRRRKEQQMSSSLKEASELNNKEINGHNIRPQTDGANGVSEASQSNTEDSTFVPREFDDGDIDEEIDPALQEKLDREVEDFARILNSDWPERMQELLSLGQERKAMPFTSNGNSFLRRNAYFGQLEPRLSNIRYIGAIALLHGGNLTKHNEPQSAIDDLA 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02441 927 Pfam Skp1 family, dimerisation domain 657 694 IPR016072 GO:0006511
Adu04g02441 927 Coils Coil 769 789 - -
Adu04g02441 927 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 252 533 IPR020796 GO:0000808|GO:0005634|GO:0006260
Adu04g02441 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 297 IPR027417 -
Adu04g02441 927 Gene3D Potassium Channel Kv1.1; Chain A 552 702 IPR011333 -
Adu04g02441 927 SUPERFAMILY POZ domain 556 620 IPR011333 -
Adu04g02441 927 Coils Coil 155 175 - -
Adu04g02441 927 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 534 IPR020796 GO:0000808|GO:0005634|GO:0006260
Adu04g02441 927 MobiDBLite consensus disorder prediction 779 818 - -
Adu04g02441 927 MobiDBLite consensus disorder prediction 409 438 - -
Adu04g02441 927 SMART skp1_3 555 656 IPR001232 GO:0006511
Adu04g02441 927 Gene3D - 60 242 IPR027417 -
Adu04g02441 927 SUPERFAMILY Skp1 dimerisation domain-like 630 700 IPR036296 GO:0006511
Adu04g02441 927 Coils Coil 710 730 - -
Adu04g02441 927 Pfam AAA ATPase domain 59 217 IPR041664 -
Adu04g02441 927 MobiDBLite consensus disorder prediction 7 29 - -
Adu04g02441 927 MobiDBLite consensus disorder prediction 747 828 - -
Adu04g02441 927 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02441 Adu-Chr4 109349975 109358713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02441 4 533 Core DNA Replication Machinery Family AT4G29910 57.856 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02441 K02607 - gmx:100782175 783.482