Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02438 ATGGCTGTGGTGAGTCCTGTGCCTGCAACAACACAAAGGATGGGTTCTGTGAGGCGAGTTCAAGAGGGTGAAATTGTTGGGGAGCCTAATCAAGCTGTGGTAGTTGATGAACCAATCTATGTTGCTGTGTCAAAAGAAGTGAAAGAGAGCAAGCTGAATCTGATATGGGCGATTCAGAACTCTGGAGGAAGGAGGATTTGCATACTTCATGTTCATGTTCCTGCAACCAAGATCCCTTTGATGGGTGCTATGTTCCCTGCAAGTTCACTGAAAGAGCAGGAGGTTCGAGCATACCGGGATATTGAAAGGCAAACCATGCATAAGACTCTTGATGAGTATCTTCGTATATGTCAACGGATGGGGGTGCAGGCGGAGAAAGTGCATATTGAAATGGACAACATTGAAAAAGGAATTGTAGAACTTGTCTCCCAACGTGGCATCCAAAGGCTTGTCATGGGAGCGGCATCGGACCGATCCCATTCTAGGAGAATGATGGACTTGAAATCTAAGAAAGCCATCTTTGTATGTGAGCAAGCTCCGGCATTTTGTTGGATACAGTTTATCTGCAAAGGGCACCTTATACACACAAGGGATTTGGTACAACAAGTTCCAAACTCTGAAGCTGAACATCCAGTACTCCCGAGATCTCAATCTGTTATTACTCCGGGCCAAAATCAAACTAGTCATCGTCGGGAGTTATTTCGCAAAGTAAGGTCTGCCAATGATGGTGCTGTAGGGGGCATTATGCATGATTCTTCTCCAGATAACTTTGAAGGGTTCTCAACTCCACCAAATAGGTTAGGTACTGATTTAAGTTCTGATGAGTCAGATAGGCTGTCAAGGACAAGGAGTCCTTCAGCTTTGTCAGTGTGCTCCGATAGTGGTGCTGTTGACCCAATGTTGAGCCCAAATTCGGTTAGTGAGATTGCCGAGAACGTAGCAGAGTTGACTTTGAGCCATGCAATCAAAGAGGATCTTCATTCTTCTCCTCCTAGTGTACTGCAGGATGGAGGAATGAATGATACTATATATGATCAACTTGAATTGGCTATGGCTGAGGCCGAGAGAGCCACACGAAACGCATATCAAGAAACATATAGGCGTGGGAAAGCTGAAAAGGAGGCCATTGAAGCTATGCGAAAGGCTAAAATCTCTGAAAGTTTATATGTAGAAGAGTTGAATCTGAGGAAAAGGGCCGAGGAAGAACTACAAAAAGAAAAAGAACAACTTCAAAATATGAAGATCCAGAGAGACAAAGTTAAGGAAGAACTCCAACTTGCACTGGATCAGAAGTCATCACTGGAGAGCCAAATTGCATCATCCGAACTTATGATAAAGGAGTATGAGCAGAAGATCATTTCTGCCGTGGATCTGTTACAAAGCTACAAGAACGAACGGGATGAGTTGCAGGTACAGCGCGATGAAGTGCTGAGAGAGGCCACGGAGTTGAGGAAAAAACAAGGAGAGGCCTCTGGCACTCGCACGCCTCAATTGTTTTCGGAGTTCTCTTTCCTTGAGATAGAACAAGCAACAAATAACTTTGATCAGTCCCTAAAGATAGGAGAAGGTGGATATGGAAGTATATTTAAAGGTATGTTGCGGCACACTGAGGTGGCTATAAAGATGTTGCACTCTGACAGCATGCAAGGACCCTTGGAGTTTCAACAAGAGGTTGATGTATTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTGTTGGAGCCTGCCCAGAATCCTTTACTCTTATCTACGAGTATTTACCGAATGGGAGCCTTGAAGACCGTCTGGTTTGCAAGGATAACACACCTCCCTTGCCATGGCAAACTCGAATTCGCATTGCTGCAGAACTTTGTTCAGCTCTCATCTTCCTTCACTCAAGTAAACCGCACCGCATAGTGCACGGTGACTTGAAACCCTCTAACATTCTCCTTGATGCAAACCTTATTAGCAAGCTAAGCGACTTTGGAATCTGCCGCATATTATCTCGTCGTGAGGATTCGACTGATAACACTACGGAGTGTTGGAGAACCCACCCAAAGGGAACTTTTGTTTACATGGATCCGGAATTCCTTGCGTCCGGGGAACTTACTCCAAAGTCAGATGTTTATTCCTTTGGAGTCATATTGATGAGATTGTTGACAGGAAGACCGGCCTTGGGAATAACAAAGGAAGTGTCCTATGCACTGGAAACCGGAAAGCTGAAATCCCTGTTGGATCCTTTAGCCGGAGACTGGCCATTCGTGCAAGCCGAACAATTGGCTCGCCTGGCCATGAGGTGTTGCGAGATGAATAGAAAGAACCGGCCGGATCTTTATTCCGATGTATGGAGGGTATTGGACCCCATGACAGCTTCCTCTGGAGGCACACTAAGTCCTTCAGGTCTTTACCAACAAACACCATCATATTTCATTTGTCCAATCTTTCAGGAAGTAATGCGAGATCCGCATGTAGCTGCGGATGGCTTCACTTATGAAGCCGAGGCCATAAGAGGGTGGCTTGACAGCGGTCACGACGATTCGCCAATGACAAATTCGAAGCTTGCGCACCGCAATCTTGTTCCGAACCGCGCACTCAAGTCTGCAATCCATGACTGGCTTCAAAGTCATTAA 2610 0.4556 MAVVSPVPATTQRMGSVRRVQEGEIVGEPNQAVVVDEPIYVAVSKEVKESKLNLIWAIQNSGGRRICILHVHVPATKIPLMGAMFPASSLKEQEVRAYRDIERQTMHKTLDEYLRICQRMGVQAEKVHIEMDNIEKGIVELVSQRGIQRLVMGAASDRSHSRRMMDLKSKKAIFVCEQAPAFCWIQFICKGHLIHTRDLVQQVPNSEAEHPVLPRSQSVITPGQNQTSHRRELFRKVRSANDGAVGGIMHDSSPDNFEGFSTPPNRLGTDLSSDESDRLSRTRSPSALSVCSDSGAVDPMLSPNSVSEIAENVAELTLSHAIKEDLHSSPPSVLQDGGMNDTIYDQLELAMAEAERATRNAYQETYRRGKAEKEAIEAMRKAKISESLYVEELNLRKRAEEELQKEKEQLQNMKIQRDKVKEELQLALDQKSSLESQIASSELMIKEYEQKIISAVDLLQSYKNERDELQVQRDEVLREATELRKKQGEASGTRTPQLFSEFSFLEIEQATNNFDQSLKIGEGGYGSIFKGMLRHTEVAIKMLHSDSMQGPLEFQQEVDVLSKLRHPNLITLVGACPESFTLIYEYLPNGSLEDRLVCKDNTPPLPWQTRIRIAAELCSALIFLHSSKPHRIVHGDLKPSNILLDANLISKLSDFGICRILSRREDSTDNTTECWRTHPKGTFVYMDPEFLASGELTPKSDVYSFGVILMRLLTGRPALGITKEVSYALETGKLKSLLDPLAGDWPFVQAEQLARLAMRCCEMNRKNRPDLYSDVWRVLDPMTASSGGTLSPSGLYQQTPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDDSPMTNSKLAHRNLVPNRALKSAIHDWLQSH 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02438 869 MobiDBLite consensus disorder prediction 255 270 - -
Adu04g02438 869 SUPERFAMILY Protein kinase-like (PK-like) 494 771 IPR011009 -
Adu04g02438 869 SUPERFAMILY RING/U-box 791 868 - -
Adu04g02438 869 Gene3D Transferase(Phosphotransferase) domain 1 587 788 - -
Adu04g02438 869 PANTHER U-BOX KINASE FAMILY PROTEIN 30 868 - -
Adu04g02438 869 SMART Ubox_2 802 865 IPR003613 GO:0004842|GO:0016567
Adu04g02438 869 MobiDBLite consensus disorder prediction 244 295 - -
Adu04g02438 869 ProSitePatterns Protein kinases ATP-binding region signature. 520 541 IPR017441 GO:0005524
Adu04g02438 869 CDD STK_N 38 191 - -
Adu04g02438 869 CDD RING-Ubox_WDSUB1_like 803 844 - -
Adu04g02438 869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 797 869 IPR013083 -
Adu04g02438 869 PANTHER OS02G0152300 PROTEIN 30 868 - -
Adu04g02438 869 SMART serkin_6 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02438 869 ProSiteProfiles U-box domain profile. 798 869 IPR003613 GO:0004842|GO:0016567
Adu04g02438 869 Gene3D Phosphorylase Kinase; domain 1 485 586 - -
Adu04g02438 869 Gene3D HUPs 30 165 IPR014729 -
Adu04g02438 869 Coils Coil 389 486 - -
Adu04g02438 869 ProSiteProfiles Protein kinase domain profile. 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02438 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Adu04g02438 869 Pfam Protein kinase domain 516 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02438 869 Pfam U-box domain 800 869 IPR003613 GO:0004842|GO:0016567
Adu04g02438 869 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 49 162 - -
Adu04g02438 869 Coils Coil 344 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02438 Adu-Chr4 109298872 109304042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02438 1 869 U-box Gene Family AT2G45910 53.008 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Adu04g02438 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02438 - - gmx:100807515 1287.71