Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02432 ATGGATGAACATTTGGAGAAAGTTCAGGCAACTGTTAAGCATCCTGATGTAGCTATCTTTTCGGGTGTTCTAAAAGAAAGAAATATCTATGAATTTTCTAATTTCATTGTCGTCCCTAACTTAGGAGCATTGAGAGTTACTAAACATAAGTTCCAGATTATTTTCAATGAGGATACATCTGTCATCAATAGTCCAGATCCTATTATATCCTCATCTGGTTTAGAACTCTCCTGCATTGATGAAATACTAGGGAGGAAAGTTGATTATGATTATTTAGTAGATTTCATTGGAATTCTTTGTGACCTAAGAAGAGGGGATGATATAGATTTTAATGGAAAAAGCTTCACTGTTATGATCCTTCAGCTATATGCTAATGGCAAAAAAATCCAGTGTAATATTATTGGAGAGTTTTTCCCGGTGTTGGATATAACTCTCTTAACCAAGTTTCAGAGAGCACCTGTAATTGTTTTGCAATCTTTTAAGGTCAAAGTGAAAACAGATAAAGTTATTTTACAGAATGTTTTGAATGTATCCACGGTTTCTGTCAATCCCGATTTAGAAGAGTCCGTTGACTTCCTTAGTCAATTCAGTATTGCAAAATGCCACTTCTCAAGATTGATTCATGCTGACTCAAGAGGTTTATATTGGAAGATTGATGATGAAACTTTTGACTGGAGGCTCATGAGAACCATTGCTAATCTAAAATCTAATGAGGAGGATGGGCAATTCTTTGTATTGGGAAAAATTACGAGTGTTGTTGATGATCCTGAGTGGTGGTACTTCTGTTGTATTTGTGGTCATCCAATTGTAGGAAATGACAATGTTTTCCGTTGTCACTTGTGCAATCGGGAGTCTGAACACGTTATTGTCAAGTATAGGGTTAAAGTTATAGTGGAAGATGGTACCTCTACTGCGATGTTTGTGTTGTTGGATACTCCAGTGACTAAATTACTTGGAAAGACTTGTTCTGAGGCATTCTTGGTCAAAGAAAACAATCATGAGGGAATCCAGTTTTTGTACTGCCCTACTTTGTTCCAACATCTTGTTGGCATGAAAACAGTTTTTCAGATTCAGACCAAGAGAGTTAACAATAAAGGTTATTGTGGTACATTTAAGGTTATCAATGTTCTTGGCGATCCACCTTTTTTTGAAAAAGCTGAGGTAGAAAAGTCTGATAATGATATTGTTGGTGGTCCTGTATTTACTCCAATCTTTGGTGACTACACTCAATATACACAAGTTGGCAGATATGGACATCAAGTGGCTACTGAAGTTCCATTACAATTGGAGACTCTTAGAGACATGCTTGATGATGTTATGTCTATTAAGATATTGTCTGCATCGCCAAATAGTGATGAAATGTGTTTCTTACTTGGTAACATAGTCTCTGTGTTAAAAAACCAGAAGTGGTTCTTTTTTGCATGTTTGTGCGGTGCACCGGTATCCCGTGTAGCAGATGTACATTATTGTAGTATGTGTCGGGTGGAATGTGTTGACGTGATTCCAAGCTATCGGATCAAGATACTTGTTACACATGCAAATGGGTGCAATGTTTTCGTCCTAGGTGATGATGCAGTTTCTCAACTTCTTGGCAAAAGTTGTTCTGAATTTTTAAGCGAGAACCCAACGTTCTCACAGTCTTTTTATGACTATAATGTTCCGGATACTATTGTTTCACTTATCAAGGACAAGCATGTGGTATTCATTTTAGATCCAAGACCTGTTGGTTATGAGTTAAAAACATCTATTCATATTGTTCGTGCAATATGTGATAACTCATCAATCATCAAAATTTTTGAAGATGCACTTAACATGAATCAAGAAAAGTTGTTTCCTTTAGAGTTGTGTGTTCCTGATTTTCCATTGGAATCTAATCATGCTGTTCAGTTTCATTCTTATGTGAACACTGATGTTGCTTCAAGCTCAAGTGTTCATTTCAATGGTGTTTCACCAAGATCTGTTATTCCCTGCAATCCCTTGCGTGCTCAACAAGTTAGTGAGAACAATGTATTTTCTGCAACAAATTCCAATGATGATCACCAGGATATTGATCTCACAATTGGACAGCAACTGCTTCTTCGTTTTGGTCAGTCTCGTGTGGACACAGATGTTGCTGAGAAAATGGATGAGTGTAGTGGCTAG 2142 0.3693 MDEHLEKVQATVKHPDVAIFSGVLKERNIYEFSNFIVVPNLGALRVTKHKFQIIFNEDTSVINSPDPIISSSGLELSCIDEILGRKVDYDYLVDFIGILCDLRRGDDIDFNGKSFTVMILQLYANGKKIQCNIIGEFFPVLDITLLTKFQRAPVIVLQSFKVKVKTDKVILQNVLNVSTVSVNPDLEESVDFLSQFSIAKCHFSRLIHADSRGLYWKIDDETFDWRLMRTIANLKSNEEDGQFFVLGKITSVVDDPEWWYFCCICGHPIVGNDNVFRCHLCNRESEHVIVKYRVKVIVEDGTSTAMFVLLDTPVTKLLGKTCSEAFLVKENNHEGIQFLYCPTLFQHLVGMKTVFQIQTKRVNNKGYCGTFKVINVLGDPPFFEKAEVEKSDNDIVGGPVFTPIFGDYTQYTQVGRYGHQVATEVPLQLETLRDMLDDVMSIKILSASPNSDEMCFLLGNIVSVLKNQKWFFFACLCGAPVSRVADVHYCSMCRVECVDVIPSYRIKILVTHANGCNVFVLGDDAVSQLLGKSCSEFLSENPTFSQSFYDYNVPDTIVSLIKDKHVVFILDPRPVGYELKTSIHIVRAICDNSSIIKIFEDALNMNQEKLFPLELCVPDFPLESNHAVQFHSYVNTDVASSSSVHFNGVSPRSVIPCNPLRAQQVSENNVFSATNSNDDHQDIDLTIGQQLLLRFGQSRVDTDVAEKMDECSG 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02432 713 Pfam Domain of unknown function DUF223 2 88 IPR003871 -
Adu04g02432 713 SUPERFAMILY Nucleic acid-binding proteins 233 361 IPR012340 -
Adu04g02432 713 Pfam Replication factor-A C terminal domain 246 360 IPR013955 -
Adu04g02432 713 CDD RPA1_DBD_A_like 1 61 - -
Adu04g02432 713 Gene3D - 1 66 IPR012340 -
Adu04g02432 713 SUPERFAMILY Nucleic acid-binding proteins 448 542 IPR012340 -
Adu04g02432 713 Gene3D - 220 377 IPR012340 -
Adu04g02432 713 Gene3D - 429 589 IPR012340 -
Adu04g02432 713 Gene3D - 75 199 IPR012340 -
Adu04g02432 713 PANTHER REPLICATION FACTOR A 1, RFA1 61 326 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu04g02432 713 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 61 326 - -
Adu04g02432 713 SUPERFAMILY Nucleic acid-binding proteins 79 199 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02432 Adu-Chr4 109133467 109137377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02432 2 348 Core DNA Replication Machinery Family AT5G08020 21.220 5.22e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02432 - - ahf:112771159 674.47