Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02431 ATGTCACGCTCGGTTGCTGTTGTTCCAGTTGAATGCAAGCGACATCTTTGTAACGTCAATCCTTGGACTGAATTCTGCAGAATCAAGGTTCAGTTGACAAGGTTGTGGAGTTTCTGTGATTATTCAGATTATGAAGAGTCTGTGTTTTTAGAAGGTTTACTGGTTGATAAATTGCTAAATAGAATCCATTGTGTTGTGAAGAAAGACTTTATCAAACACTTTCAAAATATCCTGAGGGAAGGGTGTATCTACTACATATCTCGGTTTATTGTGGTTCCAAATAATGGGTTTACTAAAGTCACGAGGCATAGATATAAGTTGATGTTTGACATTAACACAGAAGTAGAAGAAGTTACTGATATCAATTTTCCTCGGATACCATACACACTATATAAGCTGGAGGATTTGTTCGTATTTCGGAAAGATTCATCGTACTTGATAGATTTAATTGGTTTCTTGATAAGTGTTCGAGAATATCCAGAAATACAACATGGTTATGCAGATAGGATGAAATTGGTGGTGATTCAGCTATATGCAAATGGGTCTTATGTTTTGTGTTACCTGTATGGAGAATTCTTTAACCGTATGTCATCTGCATTAATGAATTCTCCTAACCAAGCTCCCATTGTTTTACTTGAATCTTTCAAAGTCAGAGTCTCTAGAGGATTCCCAGCACTTGAAAATGTGATAAATTGCAGTAGGATTTTGATTAATCCTGACCTTCCGGAGACTGCAGATTTTATTTACAGCTTGAATCCTCTTGAACCTTGTTTTACTGGTGTTCTCTCTTGTGTGGATGGTTCCGTATCTGCAAATATTGATGATGATTTTGTCAATTTTTCGAATGCTGCAAATATTCTTCGTCTCAAGGAAAAGGATGAGGATGGTATTTATAATGTTGTTGGGACTATTAAAAGTATTCATAATCATTATGATTGGTGGTATTATTGCTGTCCCTGTGGAATTGCTTTGGAATTGTTAAATAATGGTTTCAGATGTTCAGCCTGTGAAAGAGATATAAAGAATCCCATTAAAAAGTTTAAAGTTATTGTAGATGTTGAAGATTATAGTGGCCACTCTATATTCATCTTATATGATCGAGCTGCAACACTTTTATTGAAGAGGAAATTATGTGATGTTATTCAACTGTTTGAAGCTGACTATCCGGAGGTTACAAGTATTCCTATGTTGTTTCCTATTTTTGAAGATTTTGGCCAAAATGCCAAATCTGATGTCAATCTGAAGTCCCTTGGGTGTAGACTTTCTATTCCTCCAGAGATTCTGAGAACAGTTGGAGTGGACACTGATGCTCTTATTGATAAACATAATTTCCGAAAACCCGATCCATGTGTGTTTTTGGTGGGTACAATAGCTTCTATATGTAACGACAAACAGTGGTGTTTTTCAATCTGTTTGTGCGGTGAGGAGATTGAGGCACTGGCATTGGATTCCTTTTGTTCACGCTGTTTGACACACTGGTCTGATGGAATTCTAAGATTCAGAGTCAGGGTTGTTGTCAGTCACTCTAGAGGTTCTAATTTGCTGATTCTTCATGACAGAGATATTACATATCTCATGAAGAAAAATTGTTCTGATTTATTAGAAGAACATCCTATTTCTGTAATGGATGAAAAATTCGCTCTCAATGGATCTGAATTGTTGTCCAATTTGGTTTCACAAAGAATTATTTGCATGGTTGATCCTAATGGGGTTCAGGAATACCCAAGAACCATTTTTTATAATGTTTTTAGATCTTCTGATGATGCTTTGTTGATCAAACTCTTCGAAGATGCTATTGGTGATCAAACGACTATTGGAGATGAATCTTTCCGTATACATTCTCGTGGAGATAGTTTTCCAGCTGCATCAAGTATTTTATCAACTAAGACTCTTCCTGTAGATTTTCCACATCATCTCATCTGTAGTAAAAAGCTAAAGACTCAGTTTGAGAGTCTACCAGCATCTGCTAGAAAGAGATTAGAAGATGCATTTGAAGCTTGGATGGAAACAAATGCTATTGGCGGTCATAAACCATAA 2037 0.3623 MSRSVAVVPVECKRHLCNVNPWTEFCRIKVQLTRLWSFCDYSDYEESVFLEGLLVDKLLNRIHCVVKKDFIKHFQNILREGCIYYISRFIVVPNNGFTKVTRHRYKLMFDINTEVEEVTDINFPRIPYTLYKLEDLFVFRKDSSYLIDLIGFLISVREYPEIQHGYADRMKLVVIQLYANGSYVLCYLYGEFFNRMSSALMNSPNQAPIVLLESFKVRVSRGFPALENVINCSRILINPDLPETADFIYSLNPLEPCFTGVLSCVDGSVSANIDDDFVNFSNAANILRLKEKDEDGIYNVVGTIKSIHNHYDWWYYCCPCGIALELLNNGFRCSACERDIKNPIKKFKVIVDVEDYSGHSIFILYDRAATLLLKRKLCDVIQLFEADYPEVTSIPMLFPIFEDFGQNAKSDVNLKSLGCRLSIPPEILRTVGVDTDALIDKHNFRKPDPCVFLVGTIASICNDKQWCFSICLCGEEIEALALDSFCSRCLTHWSDGILRFRVRVVVSHSRGSNLLILHDRDITYLMKKNCSDLLEEHPISVMDEKFALNGSELLSNLVSQRIICMVDPNGVQEYPRTIFYNVFRSSDDALLIKLFEDAIGDQTTIGDESFRIHSRGDSFPAASSILSTKTLPVDFPHHLICSKKLKTQFESLPASARKRLEDAFEAWMETNAIGGHKP 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02431 678 CDD RPA1_DBD_B_like 148 251 - -
Adu04g02431 678 Gene3D - 122 252 IPR012340 -
Adu04g02431 678 CDD RPA1_DBD_A_like 27 115 - -
Adu04g02431 678 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 92 378 - -
Adu04g02431 678 Gene3D - 435 577 IPR012340 -
Adu04g02431 678 Gene3D - 267 403 IPR012340 -
Adu04g02431 678 Gene3D - 15 121 IPR012340 -
Adu04g02431 678 PANTHER REPLICATION FACTOR A 1, RFA1 92 378 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu04g02431 678 SUPERFAMILY Nucleic acid-binding proteins 16 122 IPR012340 -
Adu04g02431 678 SUPERFAMILY Nucleic acid-binding proteins 128 250 IPR012340 -
Adu04g02431 678 Pfam Domain of unknown function DUF223 54 119 IPR003871 -
Adu04g02431 678 SUPERFAMILY Nucleic acid-binding proteins 290 393 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02431 Adu-Chr4 109126393 109130358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02431 16 373 Core DNA Replication Machinery Family AT5G08020 22.043 8.44e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02431 - - adu:110276896 600.897