Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02420 ATGGCAGCCAATCTTGGGGTTGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATCCTTGGGCTACCAACTTTATTCTTTGGTTTATTGCTGAAATTGCCATAGTCGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAGCATGCTTTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCTTTACAGCAATATGGGGTTAGAAAACTTGAATTCTTGATCGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTTGGATATGCAAAACCTATTGCTAAAGAAGTTCTGAAGGGTCTTTTTGTGCCAGAACTAAAAGGAAGCGGTGCTACTGGTCTCGCGATTTCACTCCTAGGGGCTATGATTATCCAGTATACCACTCACTGTATGATGATTTCATCTGGATGCAGAAATTTGGAGATCCTATGTTTCATAGGCATGTTGCAGCTTAATGTGAAGAACTTGGAAGATGAGATTTCAAATAAAGACATGAATTTGTCTCCTATATTGAAGTCAATCAAGGAGCTTGAGAAAGCAGCAATCAAGATAAATGACCAGAGAAAGGAAATAGAAGCAAGTAAAGGTTGGAGAACATGGAAGAAGTACCAAATGAAAGTGAGAGATATGAATGATAGACTTATGATGGCTGAACGTGCATTCACTGACAGAGATGGCCTCTTAGGAATGACATGGCATAAGCATTTGCTAAAGTCAAAGAAGGCAAAGGTCCTTGTTGAGAATTTCTTGTGCCAAAAAGGGAAGCATCACGCCACCGCCACCACCCTAACCACCGCAGCTACCTTCTCCTTCTTCTCCTCTCTTTTAAACGCTGAACTAGTGGAACACAGCCCCTATCTCTCTCGTTCTTTCTCGTTCACAGAACAAATTAAGCTCAAGCTCCTGTTCTCTTCGTCTCAGCCATCAGAAGAAAGGCAAATTTTGTTACTGATGATAAAGCTAACCAAGGAAGAAATTGTTACTGAATTGAGAATACAGCATGGAACAAAGCAGATTTGTTTCATGGCTGTTATGTTCACTTCTTCTGTTGATGATGCCATGATGGAGATTTCTGCTGCTGTTCTTTCTCCTTCTGGCATAAACTATGAAGGTTAA 1167 0.407 MAANLGVVTGKHLAEHCRNEYPWATNFILWFIAEIAIVACDIPEVIGTAFALSMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFFAELGYAKPIAKEVLKGLFVPELKGSGATGLAISLLGAMIIQYTTHCMMISSGCRNLEILCFIGMLQLNVKNLEDEISNKDMNLSPILKSIKELEKAAIKINDQRKEIEASKGWRTWKKYQMKVRDMNDRLMMAERAFTDRDGLLGMTWHKHLLKSKKAKVLVENFLCQKGKHHATATTLTTAATFSFFSSLLNAELVEHSPYLSRSFSFTEQIKLKLLFSSSQPSEERQILLLMIKLTKEEIVTELRIQHGTKQICFMAVMFTSSVDDAMMEISAAVLSPSGINYEG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02420 388 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 143 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu04g02420 388 Pfam Transferrin receptor-like dimerisation domain 183 256 IPR007365 -
Adu04g02420 388 PANTHER METAL TRANSPORTER NRAMP1 1 143 - -
Adu04g02420 388 Coils Coil 191 211 - -
Adu04g02420 388 Gene3D - 164 288 IPR036757 -
Adu04g02420 388 SUPERFAMILY Transferrin receptor-like dimerisation domain 163 255 IPR036757 -
Adu04g02420 388 Coils Coil 163 183 - -
Adu04g02420 388 Pfam Natural resistance-associated macrophage protein 1 143 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu04g02420 388 PRINTS Natural resistance-associated macrophage protein signature 132 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu04g02420 388 PRINTS Natural resistance-associated macrophage protein signature 57 76 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu04g02420 388 PRINTS Natural resistance-associated macrophage protein signature 82 103 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu04g02420 388 PRINTS Natural resistance-associated macrophage protein signature 29 55 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02420 Adu-Chr4 108642795 108648489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02420 1 144 Inorganic Solute Cotransporters AT1G15960 81.944 2.82e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02420 K21398 - aip:107608842 409.068