Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02401 ATGTTCTCTTCGACGCCTCTGGTATCTGCTTTTGCAGGGTTTCGTGAAGCCCGAACGAGGCAAAAAGTTGAGAATGCATTAAAGCGTATAGATAGAAAGGGAGCAGTTATACAAGTTCTAGCTTTCCATGCTGCCATGACACAGGAATCAAGGCTTGCTAGTATGAAGGAGTTTGCACGTTCACCGTCAAAACAAGTGTCCCGGTTTATGGTTTGCACGGACCGAGCATCAAGGGGAATAGACTTTTGGGGAGTGGAGCACGTGATTCTGTTTGACTTCCCGAGGGATCCAAGCGAATACGTGAGGCGTGTCGGAAGAACGGCGAGAGGCGCCAAGGGTGTGGGGAAGGCGTTCATATTCGTGGTAGGCAAGCAAGTATCGCTTGCACGCAAAATCATGGAAAGAAATAGGAAGGGTCACCCCTTACATGATGTCCCTTCTGCTGTTACCTTCTAG 456 0.4912 MFSSTPLVSAFAGFREARTRQKVENALKRIDRKGAVIQVLAFHAAMTQESRLASMKEFARSPSKQVSRFMVCTDRASRGIDFWGVEHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAVTF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02401 151 CDD SF2_C_DEAD 18 121 - -
Adu04g02401 151 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 17 148 - -
Adu04g02401 151 SMART helicmild6 21 111 IPR001650 -
Adu04g02401 151 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 151 IPR001650 -
Adu04g02401 151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 145 IPR027417 -
Adu04g02401 151 Pfam Helicase conserved C-terminal domain 19 110 IPR001650 -
Adu04g02401 151 Gene3D - 15 148 IPR027417 -
Adu04g02401 151 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 17 148 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02401 39 119 Eukaryotic Initiation Factors Gene Family AT1G72730 45.122 6.92e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02401 K13179 - gmx:100780849 226.868