Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02377 ATGGGAAGGAAGCCTTGCTGTGAGAAGAAGGGTTTGAAGAAAGGTCCATGGACTGCTGAAGAAGATGAAATCCTTTCTAACTATATCAAAAACAATGGTGGCCATGGTAGCTGGCGTTCTCTTCCTAAGATCACAGGACTCCTTCGTTGTGGTAAAAGTTGCAGACTTAGGTGGACAAATTATCTTAGACCTGACATTAAAAGGGGTCCCTTTACTTCTGAGGAAGAAAAACTTGTTATACAACTTCATGGCATCCTAGGAAACAGGTGGGCTGCTATTGCTTCTCAGTTACCAGGAAGAACAGATAATGAGATAAAGAATTTATGGAACACACACTTGAAGAAGCGGCTCAAGAACATGGGAATCGATCCGAAAACACACGAGCCGGTTGCCTCGCCACATTACCCCCTCGACAAGGCACACTCCTCGTCGATTTCCACGCGCCATATGGCTCAGTGGGAGAGTGCAAGGCTTGAAGCAGAGGCAAGGCTCTCAACAGAATCATCAAAATTTAACAAGAATAATCCTTCTTCGCTCGGCGAAGGCAAAAGTACTAATTTCTAA 564 0.4468 MGRKPCCEKKGLKKGPWTAEEDEILSNYIKNNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTSEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLKNMGIDPKTHEPVASPHYPLDKAHSSSISTRHMAQWESARLEAEARLSTESSKFNKNNPSSLGEGKSTNF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02377 187 MobiDBLite consensus disorder prediction 167 187 - -
Adu04g02377 187 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Adu04g02377 187 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 177 - -
Adu04g02377 187 CDD SANT 16 62 IPR001005 -
Adu04g02377 187 Gene3D - 11 68 - -
Adu04g02377 187 PANTHER TRANSCRIPTION FACTOR MYB104-RELATED 1 177 - -
Adu04g02377 187 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Adu04g02377 187 Gene3D - 69 134 - -
Adu04g02377 187 MobiDBLite consensus disorder prediction 122 187 - -
Adu04g02377 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Adu04g02377 187 SMART sant 67 115 IPR001005 -
Adu04g02377 187 SMART sant 13 64 IPR001005 -
Adu04g02377 187 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Adu04g02377 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Adu04g02377 187 CDD SANT 70 113 IPR001005 -
Adu04g02377 187 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Adu04g02377 187 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02377 Adu-Chr4 107922955 107925967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02377 1 187 MYB Transcription Factor Family AT3G61250 73.262 2.12e-97 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu04g02377 Myb_DNA-binding 7.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02377 K09422 - gmx:100816569 323.553