Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02359 ATGGATCGGGGAGGAGGAAGAAGAGGATGTAACAATAATTCTTCCTTTTCAGTACCAACACAGATAGTGCCTCATGCCTATGACTCAGCCTTTGCCTCTCTTCAATTCCAATATCTATGGCCTTTAGTCTTTGAAGGATTTCCAGAAGATAGACCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGAATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAAATGGACAAGGCTGCATTACTAGGGAGTGTAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACAATTCCAAGTGAAACTGATGAAGTAACAATAATATAG 381 0.4094 MDRGGGRRGCNNNSSFSVPTQIVPHAYDSAFASLQFQYLWPLVFEGFPEDRPASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMDVSKSITIPSETDEVTII 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02359 126 CDD bHLH_AtAIG1_like 49 126 - -
Adu04g02359 126 Pfam Helix-loop-helix DNA-binding domain 57 103 IPR011598 GO:0046983
Adu04g02359 126 Gene3D - 49 112 IPR036638 GO:0046983
Adu04g02359 126 PANTHER TRANSCRIPTION FACTOR BHLH30 29 125 IPR045847 GO:0003700|GO:0006355
Adu04g02359 126 PANTHER TRANSCRIPTION FACTOR BHLH51 29 125 - -
Adu04g02359 126 SMART finulus 60 109 IPR011598 GO:0046983
Adu04g02359 126 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 54 103 IPR011598 GO:0046983
Adu04g02359 126 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 107 IPR036638 GO:0046983
Adu04g02359 126 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02359 Adu-Chr4 107597672 107603115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02359 46 125 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 51.724 1.30e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu04g02359 HLH 2.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02359 - - adu:107485656 229.565