Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02347 ATGGACGGAAGGGTTGCCTTGGTTCCTTGGGCAGATATGTTGAATCATAGTTGTGATGTGGATACCTTTTTGGATTATGATAATTTATCAAAGGGAATTGTCTTTACTACAGATCGGCCGTATCAACCAGGTGAGCAGGTGTTCATTTCATATGGAAAAAAATCAAATGGGGAGCTTCTATTATCGTATGGGTTTGTTCCAAGGGAAGGCGCCAATTCTTGTGATTCAATTGAGTTGTCAGTGTCACTCAAGAAATCTGATAAATCCTACAAGGAGAAATTAGAACTCTTGAAAAAGTATGGATTATCAGGATCTCAATGTTTTCCAATACAGATTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTATGGCTACAGCAGAATCAAATAAAACTACCGCCAAGAAAGATTCGAGATATCCTGAAATAGAGGAGCAAGCATTGATCCATTCAACTCCCCAACTCATTCCTAGCTACTGTTTTTCCTACATCTCCTGCGCTTACAACGTCACCCTCTGCACCAGCCTCATATCTCTTCTTTGTCAGTTTCTCATGGCTAAGCAGTTCTCCGCCAGACTCGCCTTTTGCCCTGCACCACCGATCAACTCCTTCCTGGCACCAATCAGCTCAGTAGTGGCTCGACAAGCTCCTTGCGGTTTACTACTATCCACATCATCGTTCTCTGCCCGACGGTCATCACAGTCGCCGCCACCAACAACCAGCCGTCCTGCTTCCAGCCCTCCCTCCCCCACCATTCTCCTCGTTGCTGTTGGGCCTCACAAACTCCACAGCCGCTACGTGAAAGGCAGAACCTTCCACCCTCTTCTCTCCCAAGATCGCGCAGTCCCCTTCATCGGCACCCGCAACCTCCGCCAAAGCAGACTTAGGAATATGTAG 906 0.4669 MDGRVALVPWADMLNHSCDVDTFLDYDNLSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPREGANSCDSIELSVSLKKSDKSYKEKLELLKKYGLSGSQCFPIQITGWPLELMAYAYLAMATAESNKTTAKKDSRYPEIEEQALIHSTPQLIPSYCFSYISCAYNVTLCTSLISLLCQFLMAKQFSARLAFCPAPPINSFLAPISSVVARQAPCGLLLSTSSFSARRSSQSPPPTTSRPASSPPSPTILLVAVGPHKLHSRYVKGRTFHPLLSQDRAVPFIGTRNLRQSRLRNM 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02347 301 MobiDBLite consensus disorder prediction 231 252 - -
Adu04g02347 301 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 1 173 - -
Adu04g02347 301 Pfam SET domain 8 52 IPR001214 GO:0005515
Adu04g02347 301 SUPERFAMILY SET domain 4 68 IPR046341 -
Adu04g02347 301 Gene3D set domain protein methyltransferase, domain 1 1 65 - -
Adu04g02347 301 ProSiteProfiles SET domain profile. 1 52 IPR001214 GO:0005515
Adu04g02347 301 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 82 148 IPR036464 -
Adu04g02347 301 Pfam Rubisco LSMT substrate-binding 85 140 IPR015353 -
Adu04g02347 301 Gene3D - 71 159 IPR036464 -
Adu04g02347 301 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02347 Adu-Chr4 107348588 107352447 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu04g02347 Rubis-subs-bind 4.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02347 - - adu:107485637 261.151