Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02316 ATGAGTTTTGGGGGGTTCCTTGAGAACAAACAAGGTGGTGGTGGTGCTAGAATGGTAGCTGAAATACCTTACGGCAACGGTTCTTCAAACCACCACCACCACCACCACATGGAAGCAGCAACAGCAGCGACAATAATGGCTTCTGGTGCAATCTCACACCCTCATTTGGCCAAATCCATGTTCAACAACTCACCTGCTCTCTCTCTAGCACTTCAGCAAACAAATATGGATGGGCAAGGGGATGTGATGAACAATAATAACAGGTTGTTGGTGGGTGATAATAATAATAATAACAATCCTAATACTAATAATAATAATAATTATGAGGGAAACATGATGAGCAACAACAATGGTTTGAGAAGGAGCAGGGAAGAAGAGCATGAAAGCAGATCTGGGAGTGATAACATGGACGGTGCCTCAGGTGATGATGATCTTGATGCTGCCGACATCAACAACAACAAACCCAGGAAGAAGCGTTACCACCGACACACCCCTCAGCAAATTCAAGAACTTGAAGCGCTGTTCAAGGAGTGTCCTCACCCTGATGAGAAGCAAAGGCTTGAACTAAGCAAAAGGCTATGCTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATAGAAGAACTCAAATGAAGACACAATTGGAACGCCATGAGAACACATTACTCCGGCAAGAGAACGATAAGCTTAGAGCAGAAAACATGTCATTGAGGGAAGCAATGAGGAACCCCATTTGCACAAACTGTGGAGGACCAACCATGATTGGTGAAATCTCATTGGAAGAACAGCATCTACGAATCGAAAATGCGAGGTTAAAGGACGAGTTAGACCGGGTGTGCGCACTCGCCGGAAAGTTCTTAGGCCGGCCCATTCCCTCAATTGCCCCTCATCCTCCATTGCCAAACTCAAGCTTAGAGCTTGGAGTTGGAAACAACAATAACAGCAACAATGGAAGCTTTGTTGTGGGTTCAACAATGCCATTAGGGCCTGATTTTGTTGGAATGGGCATTTCATCAAACACCTTAGGGGTGTTATCACCAACACCACCAAGCAGGGGAATTGCAACAACAAATGGGATGAATTCTTCAAATACATCATCTGGGTATGAGAGATCAATGGTTTTGGAGCTTGCATTGGGTGCAATGGATGAGTTGGTGAAGATGGCACAAAGTGGAGAACCACTTTGGATAAGGGGAATGGAAATGGGAGGAAGGGAAGTGTTGAACCATGAAGAGTACAGTAGAACAGTGACACCTTGCATTGGTTTGAGACCCAATGGGTTTGTCTCTGAGGCTTCTAGGGAAACTGCCATTGTCATCATCAATAGCTTGCCTCTTGTTGACACTTTAATGGACTCAAATCGATGGTCAGAAATGTTCCCTTGTATGGTTGCAAGAACTTCTACAACAGAAGTGATATCTAGTGGAATAAATGGAACTAGAAACGGTGCACTTCAACTTATGCAAGCTGAACTGCAAGTGCTTTCACCACTGGTTCCTGTTAGAGAGGTCAATTTTCTAAGATTTTGCAAACAACATGCAGAAGGGGTTTGGGCTGTGGTTGATGTGTCCATAGACACCATTAGAGAACCTTCTTCTGCTGCACCAACTTTTGTTAGCTGTAGAAGACTCCCTTCTGGTTGTGTTATACAAGACATGCCTAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGATGAAAGCCAAATCCACGAGCTGTATAGGCCATTGGTGAGTTCAGGAATGGGGTTTGGTGCACAACGTTGGATTGCAACTCTTCAACGCCAATGCGAGTGCCTAGCCATCTTAATGTCCTCTGCTGTTTCCCCTCCTGAACACTCTGCAATAACATCGAGTGGAAGGCGTAGCATGCTGAAGCTGGCGCAACGCATGACCAACAACTTCTGCGCCGGTGTTTGTGCCTCAACGGTGCACAAATGGAACAAGCTCAATGCCGGCAACTTCGGCGAAGACGTGAGGGTGATGACAAGGAAGAGCCTTGATGATCCCGGGGAGCCTCCTGGGATCGTCCTGAGCGCAGCCACATCCGTGTGGCTGCCAGTCTCGCCCCAGAGGCTCTTTGATTTCCTCCGCGACGAGAGGCTGAGGAGCGAGTGGGACATACTTTCCAATGGCGGACCCATGCAGGAGATGGCTCACATTGCCAAGGGACAAGACCATGGCAACTGTGTTTCACTACTACGAGCCAGTGCTATGAATTCAAATCAGAGTAGCATGTTGATATTGCAAGAGACATGCACAGACGCGTCTGGGTCGCTTGTAGTGTACGCGCCAGTGGACATTCCAGCCATGCATTTGGTCATGAATGGTGGTGACTCGGCTTACGTGGCGCTTTTGCCATCTGGATTCGCCGTTGCACCTGACGGATCCGGTGGCAGAAATGACCACAATACTGTGTCACAATCAGGAGGTGGGTCACTTCTCACGGTGGCATTTCAGATACTCGTGAACAGCCTCCCTACGGCGAAACTCACGGTGGAGTCGGTGGAGACGGTGAACAACCTCATCTCATGTACGGTTCAGAAGATAAAAGCGGCACTTCAATCCGAGGGTTGA 2586 0.4737 MSFGGFLENKQGGGGARMVAEIPYGNGSSNHHHHHHMEAATAATIMASGAISHPHLAKSMFNNSPALSLALQQTNMDGQGDVMNNNNRLLVGDNNNNNNPNTNNNNNYEGNMMSNNNGLRRSREEEHESRSGSDNMDGASGDDDLDAADINNNKPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSLREAMRNPICTNCGGPTMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPIPSIAPHPPLPNSSLELGVGNNNNSNNGSFVVGSTMPLGPDFVGMGISSNTLGVLSPTPPSRGIATTNGMNSSNTSSGYERSMVLELALGAMDELVKMAQSGEPLWIRGMEMGGREVLNHEEYSRTVTPCIGLRPNGFVSEASRETAIVIINSLPLVDTLMDSNRWSEMFPCMVARTSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIREPSSAAPTFVSCRRLPSGCVIQDMPNGYSKVTWVEHAEYDESQIHELYRPLVSSGMGFGAQRWIATLQRQCECLAILMSSAVSPPEHSAITSSGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNFGEDVRVMTRKSLDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCTDASGSLVVYAPVDIPAMHLVMNGGDSAYVALLPSGFAVAPDGSGGRNDHNTVSQSGGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQSEG 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02316 861 MobiDBLite consensus disorder prediction 1 35 - -
Adu04g02316 861 SUPERFAMILY Bet v1-like 369 602 - -
Adu04g02316 861 Pfam START domain 377 602 IPR002913 GO:0008289
Adu04g02316 861 ProSitePatterns 'Homeobox' domain signature. 189 212 IPR017970 GO:0000981|GO:0006355
Adu04g02316 861 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 109 858 IPR042160 -
Adu04g02316 861 MobiDBLite consensus disorder prediction 77 118 - -
Adu04g02316 861 ProSiteProfiles START domain profile. 367 605 IPR002913 GO:0008289
Adu04g02316 861 Gene3D - 445 600 IPR023393 -
Adu04g02316 861 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 109 858 - -
Adu04g02316 861 SUPERFAMILY Bet v1-like 630 854 - -
Adu04g02316 861 Pfam Homeodomain 157 212 IPR001356 GO:0003677
Adu04g02316 861 SUPERFAMILY Homeodomain-like 140 214 IPR009057 -
Adu04g02316 861 Gene3D - 146 230 - -
Adu04g02316 861 MobiDBLite consensus disorder prediction 119 133 - -
Adu04g02316 861 MobiDBLite consensus disorder prediction 77 164 - -
Adu04g02316 861 ProSiteProfiles 'Homeobox' domain profile. 154 214 IPR001356 GO:0003677
Adu04g02316 861 Coils Coil 208 243 - -
Adu04g02316 861 SMART START_1 376 602 IPR002913 GO:0008289
Adu04g02316 861 CDD START_ArGLABRA2_like 371 601 - -
Adu04g02316 861 CDD homeodomain 156 214 IPR001356 GO:0003677
Adu04g02316 861 SMART HOX_1 155 218 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02316 Adu-Chr4 106693385 106702367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02316 1 860 Homeobox Transcription Factor Family AT3G61150 61.812 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu04g02316 START 4.6e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02316 K09338 - gmx:100783614 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02316 04 106693385 106702367 Adu04g02316 04 106693385 106702367 ECH