Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02309 ATGCTTTCATTTATATGGTGGGTCATTGGGTTCTATTGGGTAACTGCCGGTGGCCAGAATTTGACGAGGGACTCACCTCAGCTTTATTGGATCTGCATTACATTCCTTGCTTTTGATGTTGTGATTGTGCTGCTTTGTGTTGCTGTTGCATGTCTGATTGGTATTGCTGTTTGCTGTTGCCTGCCATGCATACTTGCTATCCTGTATGTTGTAGCAGATCAGGAAGGGGCAACCAAGGAAGAAATTGAGCAGTTGCCAAAATACAAGTTCAGAGTGATAAAGGAATCTAAGAAAGAAGATGATATTCCAGAATCTTCCAAAGGAATAATGATGCAATGCGACAGCGAAGCAACTGCCGAACATGCTATTGCCTTAGAAGATGCAGAATGCTGCATCTGCCTTTCTGCCTATGATGATGGTGCTGAACTCAGAGAACTTCCATGCAACCACCATTTCCATTGCACGTGCATCGACAAATGGCTGCTTCTAAATGCCACCTGTCCTCTCTGCAAGTTAAACATTTTAAGGACTAGTAATCACCACCAAGAAGTTTGA 555 0.4324 MLSFIWWVIGFYWVTAGGQNLTRDSPQLYWICITFLAFDVVIVLLCVAVACLIGIAVCCCLPCILAILYVVADQEGATKEEIEQLPKYKFRVIKESKKEDDIPESSKGIMMQCDSEATAEHAIALEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLLNATCPLCKLNILRTSNHHQEV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02309 184 Pfam Ring finger domain 129 171 IPR001841 -
Adu04g02309 184 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 184 - -
Adu04g02309 184 SUPERFAMILY RING/U-box 119 177 - -
Adu04g02309 184 SMART ring_2 130 170 IPR001841 -
Adu04g02309 184 PANTHER TARGET OF ERK KINASE MPK-1 1 184 - -
Adu04g02309 184 CDD RING-H2_RNF111_like 129 173 - -
Adu04g02309 184 ProSiteProfiles Zinc finger RING-type profile. 130 171 IPR001841 -
Adu04g02309 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 177 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02309 Adu-Chr4 106501091 106502770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02309 1 181 C3H Transcription Factor Family AT1G68070 53.297 2.37e-70 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02309 - - adu:107485567 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02309 04 106501091 106502770 Adu04g02309 04 106501091 106502770 ECH