Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02305 ATGAATGGGGGATCTTTGGGCGGCGGGAAGCTGCAGCGGGAATGTAATTTTGATTTGAATGTCGAGGTGTGTGAAGATGTCAAGGAAACCTGCATCAATGTTGCCAATGGAAATGGTATTTATGAGGCAAATGTCATATCGGGTAAGATGGGTCAGCTCCAAGGAGACATGACAAATCTTAATCAGAGATCTATGGAAGTTGATGATGTTCGTAGTGATTTGAATGAGGTTTTCAAAGATTCCACACCAGAGGATGTTCCTGTAATTGTAATATCTGGTCATGAACAGTTCAAAATTTTTCAGGCAAAGTTGCAATTACCCTCTTCTTCCGAAAATTTAAATTCAGATGATGTTCCTGTTCTTGAAGTCTTTTTTATTTATGCTTGTTTAAGGTCATTCAGTACTTTATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTATAGCTGCTTTGAAGTCCAAAACCCCAAGTATATTATTTGATAGCATTCATGTTTCTATTTTGAAAACTCTGAAAAAACATTTGGAATACCTTTCCAATGAGGGTATTCAATTTGCATCTAATTATCTGAGGTATATGTAA 582 0.3625 MNGGSLGGGKLQRECNFDLNVEVCEDVKETCINVANGNGIYEANVISGKMGQLQGDMTNLNQRSMEVDDVRSDLNEVFKDSTPEDVPVIVISGHEQFKIFQAKLQLPSSSENLNSDDVPVLEVFFIYACLRSFSTLLFLSPFELEDLIAALKSKTPSILFDSIHVSILKTLKKHLEYLSNEGIQFASNYLRYM 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02305 193 PANTHER PHD FINGER FAMILY PROTEIN 89 191 - -
Adu04g02305 193 Pfam DDT domain 122 173 IPR018501 -
Adu04g02305 193 ProSiteProfiles DDT domain profile. 117 177 IPR018501 -
Adu04g02305 193 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 89 191 - -
Adu04g02305 193 SMART testlast3 117 177 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02305 Adu-Chr4 106438105 106438686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02305 81 193 PHD Transcription Factor Family AT5G12400 52.212 2.14e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Adu04g02305 DDT 4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02305 - - adu:107485507 384.03