Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02266 ATGGATAATAATGGATCTCCAAACCAATATCCAAACCCATACTTTTACCCTCCCAACCCTTACCAACCATACCCACCTCCACCAACTGGAATTCCAGTTCCTAATCCATATGAACATGTTCCCTATCCATACCCTTATAATCCTTCACATTCCTTCAATTATTCCTATCCCCCACCTCCTAGATCATCCTTATCATACTCTGGTTCGGGCCATATCGACTATCCTTGCCCCCCTCATCCTCAATCACCCTCCTCATGTGCCCCCTTAGACTTCAACCAGCCACCACCGAAGACATCTTATCCGGCTACTGCCCCTAGTGCTCCTACCAATCCTTACCCTGCTTATCCCTACCATGTTCCTCCAGGGAGTCAGAGTCCGTCTCGAGCTTCCCATTCTCACACCAGTAGCTTGCCATATGGATCATCTCAGTATTACTATCCACAAAATGAGGCCTATTTGTCTCCTCAGCAATCCGATGCCCACTCGCGAACCAATAGCTTTGCAGGTCCCTACTATGTGGAGAACACTAGCTCAACAGGTGGTGGAAGTGGAACCCCACAACCCAGTGATGATTCCAAGCCTTCTCCGAGTGCTATTACTTACCCGCCTTTGGATGATCTTATGAGTAATGTTCGGTTGTCTGATAGCACGCCTAGTGATATTGTGTCATCACCTCAACAGCCAGTGAGGCCCCTAATGCATTCCATTTCAACTTCAAAAATAGAGCAGAAGAAAGATGACTTTTATGGACATGCTAATAACTCCTTCTCAGGATGGGGAAATTCCTACTCTTCTCGGGTGGATTCGTCTAAACTTTCATCATCTAGTTTTGGCTCATTTAATGAGTCTGTGCAGATTGTTCCAGTGCAGAATAAAGGGTCACTGAGAGTTCTGCTTCTACATGGAAATTTGGATATATGGGTGCTTGAGGCCAAAAATCTTCCTAATATGGACATGTTCCACAAAACATTAGGTGATATGTTCGGTAAATTACCTGGCACTATGGGCAATAAAATTGAAGGAACTATGAATAAGGTGATTACCAGTGATCCTTATGTAACAATTTCTGTAGCAAACGCTGTAATTGGGAGGACTTTTGTGATTAGCAATAGTGAAAATCCTGTTTGGATGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTCGGTTCACAGCTCATCGGCATCGTGGCAATTCCAGTGGAACAGATATACTCGGGGGAGCTGGTCGAAGGCACCTATCCCATCCTAAATAGTAGTGGGAAGCCTTGTAAGCCAGGTGCTGTTCTGAGATTATCCATTCAGTATATCCCAATGGCACAACTAAGCATTTATCATCAAGGAGTTGGAGCAGGGCCTGAGTACATTGGAGTTCCTGCGACTTATTTTCCTTTGAGGAAAGGTGGAACGGTTACTCTATATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTAACGTGTTTCTTGACAATGGGAAGACTTATGTGAATGGAAAGTGTTGGTATGACATCTATGATGCCATACGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTTACATTAATAAGGGATGGTGCTGTCAAAGCATCGGATTATGCCTTGGGTGATCTTTTGAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTGTATGGGACGACCCTACATCAAGAAGCATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACAAGACGATTTTTCAAGAATTCTTCAGTGCATGTGCTGCTTTGTCCTCGCAGTGCTGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACCGTTATTGTGGATGCTGATGCTGGAAATAACATGAGAAAAATAATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGACGTTATGATACTCCCGATCATCATATACTTAGGACCCTGCATACACTGCATAAAGATGACTATCACAACCCTACTTTCACGGGTAATGTAGGTGGTTGTCCCCGGGAGCCATGGCATGACTTGCATTCCAAAATTGATGGTCCAGCAGCTTATGATGTTTTGAAAAATTTTGAGGAGCGCTGGTTAAGAGCTTCAAAACCTCATGGGATCAAAAAGTTAAAGAAATATGATGATGCTTTGCTTAAGCTGGAAAGAATTCCAGATATCATTCGCATGACTGATCTTCCTTGTATTGGTCATGACGATCCTGAGTCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAAGGATTTCCAAAGGATCCAAAAGAAGCTTCTAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATCGACATGAGCATACATACAGCATATGTGAAGGCCATTCGAGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGATCTTGGTGCTAATAATTTGATACCATTGGAAATTGCTCTGAAGATTGCTGAAAAGATAAAAGCACATGAAAGATTTGCAGTGTATATTGTTATTCCAATGTGGCCAGAAGGTGTTCCGACCGGGGCTGCTACACAAAGGATTCTGTATTGGCAGAATAATACAATGCAAATGATGTATGACACTGTTTACAAGGCTTTGGTTGATGCTGGGGTTGAAGCAGCATTCTCTCCACAAGACTATTTGAATTTTTTCTGTCTAGGCAATCGGGAGTCCACAAGTATGTATGATAATGTCACAGTCTCTGGAGCTCCTCCCCAGGCAAATAGTGTCCAAGCAAATAGTCGAAATAGCCGGCGTTTCATGATTTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGATCCGCAAACATCAATCAACGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCCTATCAACCACATTATACCTGGGCAAGAAAATCTACTTACCCCCTTGGACAAGTCCATGGATATAGGATGTCGCTTTGGGCAGAACACACAGGAACAATTGAAGATTGTTTCTTGCAGCCAGAGAGCCTCGAGTGCGTGCGAAGGGTTAAAGCGATGGGTGAAATGAACTGGAGACAGTATGCAGCAAATGAAGTAACAGAGATGAGAGGACATCTAATGAAATACCCTGTTGATGTTGATAGAAAGGGCAAAGTTAGACCCCTTCCTGGCCATGAAGAGTTCCCTGATGTTGGAGGGAAAATAGTTGGGTCATTCCTTGCCATGAAGGAGAATCTAACCATTTGA 3351 0.4282 MDNNGSPNQYPNPYFYPPNPYQPYPPPPTGIPVPNPYEHVPYPYPYNPSHSFNYSYPPPPRSSLSYSGSGHIDYPCPPHPQSPSSCAPLDFNQPPPKTSYPATAPSAPTNPYPAYPYHVPPGSQSPSRASHSHTSSLPYGSSQYYYPQNEAYLSPQQSDAHSRTNSFAGPYYVENTSSTGGGSGTPQPSDDSKPSPSAITYPPLDDLMSNVRLSDSTPSDIVSSPQQPVRPLMHSISTSKIEQKKDDFYGHANNSFSGWGNSYSSRVDSSKLSSSSFGSFNESVQIVPVQNKGSLRVLLLHGNLDIWVLEAKNLPNMDMFHKTLGDMFGKLPGTMGNKIEGTMNKVITSDPYVTISVANAVIGRTFVISNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGELVEGTYPILNSSGKPCKPGAVLRLSIQYIPMAQLSIYHQGVGAGPEYIGVPATYFPLRKGGTVTLYQDAHVPDGCLPNVFLDNGKTYVNGKCWYDIYDAIRQARRLIYITGWSVWHKVTLIRDGAVKASDYALGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKNSSVHVLLCPRSAGKRHSWYKQKEVGTIYTHHQKTVIVDADAGNNMRKIIAFVGGLDLCDGRYDTPDHHILRTLHTLHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLKNFEERWLRASKPHGIKKLKKYDDALLKLERIPDIIRMTDLPCIGHDDPESWHVQIFRSIDSNSVKGFPKDPKEASSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPLEIALKIAEKIKAHERFAVYIVIPMWPEGVPTGAATQRILYWQNNTMQMMYDTVYKALVDAGVEAAFSPQDYLNFFCLGNRESTSMYDNVTVSGAPPQANSVQANSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARKSTYPLGQVHGYRMSLWAEHTGTIEDCFLQPESLECVRRVKAMGEMNWRQYAANEVTEMRGHLMKYPVDVDRKGKVRPLPGHEEFPDVGGKIVGSFLAMKENLTI 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02266 1116 Gene3D Endonuclease Chain A 775 1014 - -
Adu04g02266 1116 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 628 663 IPR001736 GO:0003824
Adu04g02266 1116 Pfam Phospholipase D C terminal 1036 1106 IPR024632 -
Adu04g02266 1116 Gene3D Endonuclease Chain A 504 742 - -
Adu04g02266 1116 Pfam Phospholipase D Active site motif 629 663 IPR001736 GO:0003824
Adu04g02266 1116 Pfam Phospholipase D Active site motif 963 989 IPR001736 GO:0003824
Adu04g02266 1116 SUPERFAMILY Phospholipase D/nuclease 473 728 - -
Adu04g02266 1116 CDD C2_plant_PLD 297 449 - -
Adu04g02266 1116 SMART pld_4 628 663 IPR001736 GO:0003824
Adu04g02266 1116 SMART pld_4 962 989 IPR001736 GO:0003824
Adu04g02266 1116 PANTHER PHOSPHOLIPASE D 209 1116 IPR015679 -
Adu04g02266 1116 MobiDBLite consensus disorder prediction 1 38 - -
Adu04g02266 1116 MobiDBLite consensus disorder prediction 210 228 - -
Adu04g02266 1116 SUPERFAMILY Phospholipase D/nuclease 793 1048 - -
Adu04g02266 1116 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 962 989 IPR001736 GO:0003824
Adu04g02266 1116 Pfam C2 domain 302 428 IPR000008 -
Adu04g02266 1116 SMART C2_3c 303 425 IPR000008 -
Adu04g02266 1116 MobiDBLite consensus disorder prediction 123 196 - -
Adu04g02266 1116 MobiDBLite consensus disorder prediction 94 120 - -
Adu04g02266 1116 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 300 451 IPR035892 -
Adu04g02266 1116 Gene3D C2 domain 297 436 IPR035892 -
Adu04g02266 1116 PANTHER PHOSPHOLIPASE D ALPHA 1 209 1116 - -
Adu04g02266 1116 MobiDBLite consensus disorder prediction 11 38 - -
Adu04g02266 1116 ProSiteProfiles C2 domain profile. 276 426 IPR000008 -
Adu04g02266 1116 MobiDBLite consensus disorder prediction 57 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02266 Adu-Chr4 105743245 105750663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02266 171 1116 Phospholipase D Gene Family (Wang group) AT2G42010 70.769 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02266 K01115 - gmx:100791059 1695.63