Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02239 ATGGAAACTGCCCGCAAGTTGAAGTCCCACCGCAGGAGGCAAAGGTGGACAGATAAGTCCTACAAGAAATCCCATCTCGGCGATGAATGGAAGAAATCCTTTGCTGGTTCATCCCATGCCAAGGGAATTATCCTTGAGAAGATCCCAACTCTGCCATTCGTAAGTGTGCCAGAGTGCAGATCAGCCTTTCTGGTTGCGCTCCGCCATGCTCTCCGTTCGATCTCCGTCGCTCCCATCTCTGATCTGTCATGCTCTGCATCTTTTGGTTCGCTCCATTCGGTGGTGATGATGATTTTGACAGAGGAGAGGCTAATGGGAATGGTGAAACGACAGAGATGGATCACAACTCTTCCGCCTCCACCCACACTGTACAGTCCTCTTTatgtgtcggatgataattttaatagCGGTGGTGAGGAGGATCCCGACGACAACGATGAAGCTGGTTAA 450 0.4844 METARKLKSHRRRQRWTDKSYKKSHLGDEWKKSFAGSSHAKGIILEKIPTLPFVSVPECRSAFLVALRHALRSISVAPISDLSCSASFGSLHSVVMMILTEERLMGMVKRQRWITTLPPPPTLYSPLYVSDDNFNSGGEEDPDDNDEAG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02239 149 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 49 IPR006032 GO:0003735|GO:0005840|GO:0006412
Adu04g02239 149 PANTHER 40S RIBOSOMAL PROTEIN S23 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02239 Adu-Chr4 105241974 105242687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02239 1 65 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 57.353 1.68e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02239 K02973 - gmx:100500013 92.0485