Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02228 ATGGGCTTCCGTTTACCTGGTATCAAAAAATCTACACAAGTAACCTCAGAGTGGAGAAGTCCCAAAAGGGTATCTTGCAGTAATGCAGTGTATGTGGGAGAAAACATGAAGAGGTTTGTGATTCCAATAGCACACTTGAACCAACCTTCCTTTCAAGACTTGTTGAGTAAAGCAGAAGAAGAATTCGGATATGTTCATCCGATGGGTGGCCTCACAATTCCATGCAGAGAAAATATGTTCTTAGATATCATATCAGTTCTGGCTTAA 267 0.4045 MGFRLPGIKKSTQVTSEWRSPKRVSCSNAVYVGENMKRFVIPIAHLNQPSFQDLLSKAEEEFGYVHPMGGLTIPCRENMFLDIISVLA 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02228 88 Pfam Auxin responsive protein 23 87 IPR003676 GO:0009733
Adu04g02228 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 28 87 - -
Adu04g02228 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02228 Adu-Chr4 105087968 105088234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02228 13 87 Calmodulin-binding Proteins AT4G34750 39.080 1.20e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02228 K14488 - gmx:100795597 113.235