Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02199 ATGAGTGCAAGGACAAGCCGCGGCGGCGGTAGCAGTGGCGCTAGTGGGAGTGGTACCATGGGTAAGGGTAGTGGCGGTCCTTGCGGTGCTTGCAAGTTTCTGAGGAAGAAATGTGATCCGGGATGTGTCTTTGCTCCGTACTTCGATCCTGATCAAGGTGCAATCTACTTTGCATCGGTGCACAAGGTTTTTGGGCTAGCAACGTTGTGGAATAGACTGTTCGCGATTGAGGGCGTGGCCAGCAACCACCAAAAATGGGCGAGATGTGCAATGGACATTGTTAGAGAAAATCAGCGCGCGATGGAAGAAGGCCACGTGGTTTCGATGTCAAATTTTGTGGGCTTAATCACTCTAGTGGCAGCATCTCCGTTCTTCAAGGACATCAAGCACCTGAGACATATGAATGATGGAGACAGCGAAGCTTTTCATTTGAAGAGAATACCAAGCACTGCAAATCAAGATCGAGGGTGGCAGAGAGAAGCCTTGAGGACCTCGTCAGCGCAGTGGCGGTCCAAACCACCAACAGAGCCAGAAAACTCCAGTGCACACCAGAGATCAAGTAGCAGCGACAAGCAGCAATACCTTCTGTTGAGGCGGACTAGGTCAGATCCGTGCATCAATGATGTCGGGATGGAATGGGTGGATATCTTCTTGTAG 657 0.5099 MSARTSRGGGSSGASGSGTMGKGSGGPCGACKFLRKKCDPGCVFAPYFDPDQGAIYFASVHKVFGLATLWNRLFAIEGVASNHQKWARCAMDIVRENQRAMEEGHVVSMSNFVGLITLVAASPFFKDIKHLRHMNDGDSEAFHLKRIPSTANQDRGWQREALRTSSAQWRSKPPTEPENSSAHQRSSSSDKQQYLLLRRTRSDPCINDVGMEWVDIFL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02199 218 MobiDBLite consensus disorder prediction 1 19 - -
Adu04g02199 218 ProSiteProfiles LOB domain profile. 26 130 IPR004883 -
Adu04g02199 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 67 - -
Adu04g02199 218 Pfam Lateral organ boundaries (LOB) domain 27 76 IPR004883 -
Adu04g02199 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 67 - -
Adu04g02199 218 MobiDBLite consensus disorder prediction 163 191 - -
Adu04g02199 218 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02199 Adu-Chr4 104365907 104371417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02199 14 76 AS2 family AT2G42430 53.968 2.69e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu04g02199 LOB 6.1e-14 No_clan