Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02194 ATGGAGGCAAGAGAAGCTATTAGCTCTGGGGTTACGGTGATAGGGGCGGAAGCTCCCTCTGCATACCATGTGGCACCAAGGAGTGAAGCTCCGAGCCAAGTTCCTGGCCCGGATGCAGCTGCTAATGCTGCTCTTGGTGTTTCGCCCGTGAGTGTGGGATTGGATGGAACAACAGTTAAGAAAAAACGTGGTAGGCCAAGGAAGTATGGACCGGATGGATCGGTTAATATGGCATTGTCACCATTGCCAATTTCTTCTTCGGCTCCGTCTTCTAACGAATTTTCGAGCTTCCATTCAAGTGGCAAGCGAGGGAAATCGCGGGGTATGGAGTACAAGCACTCAAAGAAATTCGGAGGAGGGGATATTCTAGGAGATTCCATGGGTACAAGCTTTATGCCCCATATCATTACTGTCAATGCTGGCGAGGACATCACAATGAAGGTTATATCGTTTTCTCAACAAGGACCACGAGCTATATGCATACTATCTGCTACTGGTGTAATTTCAAATGTTACGCTTCGCCAGCCTGATTCTTCAGGAGGAACTTTGACCTATGAGGGTCGTTTCGAGATACTTTCCTTGACTGGATCATTTATGCCTACTGACAACGAAGGAACGAGAAGCCGGTCAGGTGGGATGAGTGTCACCTTGTCCAGCCCTGATGGCCGTGTCTTAGGTGGTGGCGTTGCTGGTCTTCTTGTAGCTGCCAGTCCTGTGCAGGTGGTTGTTGGAAGTTTTCTGCCAAGCAACCAGCAAGATCCGAAACCAAAGAAGCAGAAGCATGATTACGCACCACCACCAGCAGTTAACCCCCCCGCCGTTGCAGTGTCCTCTGCGCCACCACCCTCAACTAATGGCGATAAAGAGGATGTCATGGGTGGGCACGTGATGCAACACAATCCCGGAGCCTTCAACTCTAGCCTCACTCCTCCCTCGGCCTTCCGAAGGGACAGCTGGGTTAACATGCATTCCATGCCGGACTCGATTAAATCCACCACGGATATTAACATATCTTTGCCTGATGATTGA 1029 0.5024 MEAREAISSGVTVIGAEAPSAYHVAPRSEAPSQVPGPDAAANAALGVSPVSVGLDGTTVKKKRGRPRKYGPDGSVNMALSPLPISSSAPSSNEFSSFHSSGKRGKSRGMEYKHSKKFGGGDILGDSMGTSFMPHIITVNAGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLTGSFMPTDNEGTRSRSGGMSVTLSSPDGRVLGGGVAGLLVAASPVQVVVGSFLPSNQQDPKPKKQKHDYAPPPAVNPPAVAVSSAPPPSTNGDKEDVMGGHVMQHNPGAFNSSLTPPSAFRRDSWVNMHSMPDSIKSTTDINISLPDD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02194 342 CDD DUF296 133 246 IPR005175 -
Adu04g02194 342 MobiDBLite consensus disorder prediction 79 102 - -
Adu04g02194 342 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 341 - -
Adu04g02194 342 MobiDBLite consensus disorder prediction 24 110 - -
Adu04g02194 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 341 IPR039605 GO:0003680
Adu04g02194 342 Gene3D - 133 262 - -
Adu04g02194 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 249 - -
Adu04g02194 342 ProSiteProfiles PPC domain profile profile. 128 267 IPR005175 -
Adu04g02194 342 MobiDBLite consensus disorder prediction 247 293 - -
Adu04g02194 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 246 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02194 Adu-Chr4 104093194 104095390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02194 10 263 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.394 1.69e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02194 - - gmx:100777213 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02194 04 104093194 104095390 Adu04g02194 04 104093194 104095390 ECH
Adu04g02194 04 104093194 104095390 Adu02g02266 02 87500515 87505233 PCT