Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02188 ATGGCTGCTTGTGCTTTGTTCACTGGTGCCAGTAACAACACTGCCGAAGATGGGAATGTCAGCACCACCACCACCACCACCAACGGCGCTGCTGCTGCCGGAAGTGGTAGTAGCCCTCTCACCAGTGCTTCCAGCAACATCAGCGCCAGTGAAGAACAACAACAACAACAACACATGCTTCTTCTCCATGGTACTAGTGGCTTCATGAATCAGCCTCATTGTGAGAGGAAATTAGTGAGAAAAAGAATGGCTTCTGAGATGGAACTTCACCCTTCCATAACCAACACCAACACCACCACCACCACCATTTCTGAGTATCCTAGGTTTCCTCGTAGAACCACCAACAACATCAACACCTCCTCTTTCATTCAAAAGGGCTCCCCAGTTGGTACAGGTAGTAATTGTAACTATCCTTATAATAATAATAACAATAACAATAATAATATTAATAATAACAATAATAGTAATAGTATTAGTGATGTTGTTGTATCAAGAGATAACGTTACTATTCCAAATTACCCCATTGTGACGCTCACAACCAACTACTCCACTATGATGCTACCTTCTCTTTCATCATCTTCATCATCGTCATCATCTTCTTCCACCAATCTCATCAACACCGTCAATTCTTCCTCGCCCTCAATACCCTCCACAACCATAACCTTTGCGGATTCTCCCATAAGGAACAACTCTGCAAATATTGTTGAGGTTGTTACTTCTTCGCCTTCTTCCATGGATGAAAGCTCAGCCGCTTCTAATTGGATCGATGGAATATTGAAGGATCTAATTCACAGCTCTAATAGTGTCTCAATCCCTCAGCTCATCAACAACGTCAGGGAGATTATATACCCTTGCAACCCAAACTTGGCCATGCTTCTTGAGTACAGGCTCCGCCTCCTCACTTCTGACTCCTCCTCCGCCGCCGTGCCCGCAGCACCACCGCCACCACCGCCTCCACAAAACAAAACTCCGGTTATGAAGCAAACAAATACTTCAAACATGCATGCTTACGGTGCTATACATTTTCAAGATTCATCTTTGAACCAGTACTGGCCTGTAGTACCGCCAACGCCGTTAGATTCTAACAACAACAATTCAGTTTCGTTGGCCAATACTTTACCATCACCGCCACCGCCTCCTCCGCCGCCACAGCCACCGCAACAAGAGAAACCCGAAGAAGATCTTGTTACAGCACCGGCAACCACCACGAGCACCGCCACCGCCACAGAAATGGCGGTGCTAACGAGAAAGAAAACCGAGGAGATGAATCAACAGAAGAAGAAAGACGAAGAAGGCTTGCACCTCCTCACACTACTCCTCCAGTGCGCAGAAGCAGTTTCAGCGGAGAATCTAGAAGACGCGAACAAGATGCTTCTAGAAATTTCTCAACTGTCGACGCCGTTCGGCACATCAGCGCAACGCGTGGCAGCGTATTTCTCGGAAGCCATATCCGCAAGGCTGGTCAGCTCTTGCCTCGGAATCTACGCAACGCTGCCAATCGTTCCTCACAGCCAGAAAGTGGCTTCCGCTTTCCAAGTCTTCAACGGAATCAGCCCCTTCGTCAAGTTCTCCCACTTCACCGCCAACCAAGCCATTCAAGAAGCGTTCGAGAGAGAAGAAAGGGTTCACATCATAGATCTAGATATAATGCAAGGCCTCCAGTGGCCTGGTCTCTTCCATATTCTGGCTTCCAGGCCCGGTGGGCCTCCTTACGTGAGACTCACGGGCCTTGGAACCTCTATGGAAGCGCTCGAGGCCACTGGTAAGCGGTTATCGGATTTTGCCAATAAGCTTGGCCTTCCGTTTGAATTCTTTGGCGTTGCGGAGAAAGTTGGGAACGTTGATCCTGAGAGGCTTAATGTTAGTAAGGCTGAGGCTGTTGCTGTTCATTGGTTGCAGCATTCTCTTTATGATGTTACTGGTTCGGACACAAACACTTTGTGGCTTTTGCAGAGGTTGGCACCTAAGGTGATAACAGTGGTAGAGCAAGACCTAAGCAACACAGGTTCATTCTTGGGAAGGTTTGTGGAAGCCATACACTACTACTCAGCACTATTTGACTCCCTTGGTTCAAGCTATGGAGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAACTACTCTCAAGGGAGATTCGGAATGTTCTAGCTGTTGGGGGTCCATCAAGGACTGGTGAACCAAAGTTTCATAACTGGAGGGAGAAGCTTCAACAATGTGGATTTAGAGGCATATCACTAGCTGGTAATGCTGCTACACAAGCAAGTTTGTTACTTGGTATGTTCCCTTCTGAAGGGTACACTTTGGTGGAGGACAATGGTATTCTTAAACTTGGTTGGAAGGATCTTTGTTTGCTCACTGCTTCAGCTTGGAGACCACCCTATACCACTGCAATGGCTCATCATCATAGTTAA 2412 0.4731 MAACALFTGASNNTAEDGNVSTTTTTTNGAAAAGSGSSPLTSASSNISASEEQQQQQHMLLLHGTSGFMNQPHCERKLVRKRMASEMELHPSITNTNTTTTTISEYPRFPRRTTNNINTSSFIQKGSPVGTGSNCNYPYNNNNNNNNNINNNNNSNSISDVVVSRDNVTIPNYPIVTLTTNYSTMMLPSLSSSSSSSSSSSTNLINTVNSSSPSIPSTTITFADSPIRNNSANIVEVVTSSPSSMDESSAASNWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAMLLEYRLRLLTSDSSSAAVPAAPPPPPPPQNKTPVMKQTNTSNMHAYGAIHFQDSSLNQYWPVVPPTPLDSNNNNSVSLANTLPSPPPPPPPPQPPQQEKPEEDLVTAPATTTSTATATEMAVLTRKKTEEMNQQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFGVAEKVGNVDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVITVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYTTAMAHHHS 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02188 803 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 183 793 IPR005202 -
Adu04g02188 803 MobiDBLite consensus disorder prediction 11 57 - -
Adu04g02188 803 MobiDBLite consensus disorder prediction 372 389 - -
Adu04g02188 803 MobiDBLite consensus disorder prediction 189 212 - -
Adu04g02188 803 MobiDBLite consensus disorder prediction 309 323 - -
Adu04g02188 803 MobiDBLite consensus disorder prediction 353 404 - -
Adu04g02188 803 PANTHER PROTEIN SCARECROW 183 793 - -
Adu04g02188 803 MobiDBLite consensus disorder prediction 353 371 - -
Adu04g02188 803 MobiDBLite consensus disorder prediction 306 327 - -
Adu04g02188 803 Pfam GRAS domain family 436 791 IPR005202 -
Adu04g02188 803 ProSiteProfiles GRAS family profile. 426 791 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02188 Adu-Chr4 103921718 103925051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02188 433 791 GRAS Transcription Factor Family AT5G41920 57.337 1.26e-141 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu04g02188 GRAS 4e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02188 - - gmx:100803919 926.776