Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02163 ATGGAATCTAACTCAGACATGTTCAGGGTACCTTCTGCAGGAGGAGGAGGAGGAGGAGGAACGGGACCATCGCCTTCGTCTTCGTCTTCGTCTTCCTCTTTGGTTTCTTCGTCGTCTTCGTCATTGTCGTCTTCGAATTCTAGAAGGTTCGGAACTATTTCTCCCTCTAACATCATTAACGCACCGCTGTCGCTATTATTGGAATATTCAGGGATTCTTCGCAACAATAACAACACCACCACCACCAGGTCGAATTTCAATAACCAAGAACCTAACCCTAACCCTAATTCCGAGCCTTCCGTAAATGACGGCGAGTTATCGATCAGGATCATTAGTCCTTCCGAACACGATAATCACGATAATCATCGTCACAGGGAGGAGCAACCTTCGTCTTCTGGTGGGGGTGGTTTGGTTGTGGGGCTTCCTCACGATGAGGGTGTGTCCGTTATGCCCAATTCGAGCACCGGAGACACCGGGATTGGGAACGGGAATGGGATTGGAAACGGCGACTCAGGGACCGGCGGCGAGGGTGGCGGCAATGGGAGGGATTCTTCTTACCAGAGGTATGATATTCAGCATGCTGCAAGGTGGGTGGAGCAGGTTCTTCCGTTCTCCTTGCTCCTCTTGGTGGTCTTCATCCGCCAGCATTTACAAGGGTTTTTTGTTACAATTTGGATTGCGGCTGTCCTTTTCAAGTCGAATGACATTCTAAGAAAACAAACAGCTCTGAAGGGAGAGAGGAAAATACCTATTCTCATTGGGATTTCTGTTGCATTTTCACTTCATGTGATTAGCATCTATTGGTGGTATCAGAATGATGATCTGATGTATCCGCTGGTTATGCTTCCTCCGAGAGAGATACCGCCTTTCTGGCATGCAATTTTCATCATCATGGTTAATGACACTTTGGTCCGCCAGGCTGCAATGGTATTCAAGTGTATATTGTTGATCTATTACAAGAACAGCAGAGGCCGAAATTATCGTAGGCAGGGGCAAATGCTGACTCTAGTTGAGTACCTTCTTTTGCTATACCGTGCCTTGCTGCCGACACCGGTTTGGTATCGTTTCTTTCTAAACAAAGAATATGGAAGCCTGTTTTCATCATTGATGACAGGACTGTATCTGACATTTAAGCTCACATCCGTGGTTGAAAAGGTGCAAGCCTTCTTTGCTTCAGTGAAGGCATTGTCACGGAAAGAAGTGCATTATGGTTCTTATGCAACATCAGAGCAGGTGATTGCGGCTGGTGATCTTTGTGCTATTTGTCAAGAGAAGATGCATGCTCCAATATTACTTCGTTGTAAACACATCTTCTGTGAAGATTGTGTATCAGAGTGGTGA 1341 0.4631 MESNSDMFRVPSAGGGGGGGTGPSPSSSSSSSSLVSSSSSSLSSSNSRRFGTISPSNIINAPLSLLLEYSGILRNNNNTTTTRSNFNNQEPNPNPNSEPSVNDGELSIRIISPSEHDNHDNHRHREEQPSSSGGGGLVVGLPHDEGVSVMPNSSTGDTGIGNGNGIGNGDSGTGGEGGGNGRDSSYQRYDIQHAARWVEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKIPILIGISVAFSLHVISIYWWYQNDDLMYPLVMLPPREIPPFWHAIFIIMVNDTLVRQAAMVFKCILLIYYKNSRGRNYRRQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQAFFASVKALSRKEVHYGSYATSEQVIAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEW 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02163 446 MobiDBLite consensus disorder prediction 21 55 - -
Adu04g02163 446 MobiDBLite consensus disorder prediction 78 184 - -
Adu04g02163 446 MobiDBLite consensus disorder prediction 148 169 - -
Adu04g02163 446 Pfam RING-type zinc-finger 419 443 IPR027370 -
Adu04g02163 446 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 446 IPR013083 -
Adu04g02163 446 SUPERFAMILY RING/U-box 410 446 - -
Adu04g02163 446 MobiDBLite consensus disorder prediction 78 103 - -
Adu04g02163 446 MobiDBLite consensus disorder prediction 1 55 - -
Adu04g02163 446 ProSiteProfiles Zinc finger RING-type profile. 419 446 IPR001841 -
Adu04g02163 446 ProSitePatterns Zinc finger RING-type signature. 434 443 IPR017907 -
Adu04g02163 446 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 28 446 IPR044235 GO:0061630|GO:1904294
Adu04g02163 446 MobiDBLite consensus disorder prediction 110 129 - -
Adu04g02163 446 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 28 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02163 Adu-Chr4 103103567 103108298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02163 48 446 C3H Transcription Factor Family AT5G01960 64.865 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02163 - K22379 aip:107639742 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02163 04 103103567 103108298 Adu04g02163 04 103103567 103108298 ECH