Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02150 ATGCATGATGTTTGTTACTGGGACAGAGGGAAAACCATAAAATTCAGCACTTCAGGCAGTGACATCTCTGAGGCATCATTCCCATTGCAGAAAGTAGAAGAAGCAAGATGCCTTTTGGTTTTCGGAATATATTTTATGATTTTATGTTGGATGTCTCCATTGTTTAAGttATATATACAAGTTTTAAAGACTAAGCAGTGCTGCAAACTCTCACTTGTGCTACGAAAACTTGTAACCGTCACAACGATGAGCACAACCAGCACGGGTACTATGATTCCAAATAGGAGAAGGATACATGGATATGTTTTGGCTGTTTCATTTTGTTATTTAATTTCCACAACAGTGGCACAGAGCACACACCCCTCAGAAGTGAATGCATTGTTACAAATCAAGAAAAGTTTGATTGATCCCTTAAACCATTTGTGGAACTGGAACAAAGGTGATCCATGTACATCAAATTGGAATGGTGTCTTGTGTCCTCTGAATGTTGGGGCTGATGGTCATTTCCATGTCAAAGAGCTCTACTTAATGACTATGAATCTCTCTGGAAATTTGGTACCCCAACTTGGTCAGCTATCTCAACTAGAGATAATGAACTTCATGTGGAATAACATAACAGGAAGTATACCCAGGGAGATAGGAAACATCACATCATTAAGACTCTTGCTCCTGAATGGAAATGCACTATCAGGTAATTTACCATATGAGCTTGGCAATCTTCAAAATCTAAACAGATTTCAAGTTGACCAAAACCAGCTCTCCGGTCCAATACCGCCTTCATTCGCCAACTTGAGCTCTGTCAAGCACATGTTAGTCCATTTTCTTACCGCCTTCATTCGCCGACTTGTGCATTTGTTATGCTTTATTTGTTTGTGTTCTTGCAGCCACATGAACAACAACTCATTTAGTGGTCAAATTCCTCCCAATCTTTCAAACCTATCCAACCTCCTTCACTTGCTTCTGGATACCAATAATTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACCCCAGCTGCGGATACTCCAACTTGATAACAATCACTTCACAGGGAGCAGAGTTCCTTCTTCCTATGCAAACTTATCTAGACTAGCAAAATTAAGTCTCAGAAACTGCAGTTTGCTAGGAGAAGTGCCTGATCTCAGTTCAATACCACAGCTTTACTATCTAGATCTTAGCTGGAACAATCTTATTGGACCCATACCATCGAAAAAACTTGCTGAAAATATGACTACCATTGATCTTTCTAATAACAATCTGAATGGATCAATTCCTGGATACTTCTCAGAGCTACCTTCTCTTCAAAGATTGTCTCTTGAGAACAACAACTTTTCAGGATCAATCTCTGCTAAGATATGGCAGAAGATGACTCTCACTACTAATGCTAAATTAACAATCGACCTACGAAACAACTCACTTTCAAGAATTTTGGGAGATCCGAGTCCTCCGCCAAACGTCACCTTAAGGCTTGGAGGAAATCCTATATGTAAGAGTTCTCAAACTAGTGGAATATTGGCCAAACAATGTGGATTTGAAGGAGAAGAAGAAGACAATTACTTAACAAATTCAACAACTACATGTCCCCCTCAAGCTTGTTCAGTGAATGATTTCTTTGAATATGTCCCAGATTCACCTATTCCTTGCTTTTGTGCATCACCTCTTAGAATTGGATACCGGCTGAAAAGCCCGAGTTTTTCTTTCTTCCCACCATACAAAGCTTCATTTAGATCATATGTTACCCATGCTTTGAACTTGGACTTCTATCAGCTATCAATAGATTCATATTCTTGGGAAGAAGAAGAAACTCGTCTTAGGATGTATTTGAAACTCTTTCCTGAGGCTAGTTATTCACACAATGAGTTCAATTCATCTGAGGTCTATCGAATGCGAAGCATATTCTCATCATGGAATTTTGGTGGAAGTGATTTTTATGGGCCATATGAACTTTTGAATTTCACCCTTGAGGGACCTTATGCATATTTAATTGCAAAATCAGAAAAGAGCAAAAGTAGCAGATTGGAAATAATTTTTGCTGTAGTAGCAGCTGTGGCAGTTGTTATAGCAATCTCAGCAATAGTAACTCTCATTATTCTAAGAAGAGATATCAAAAACCAGGACACATTTTCGAGAAGACGTCGCTCCTCTAGTATTCCTATCAAAATAGATGGTGTAAAAGAATTCACTTTCAAAGAAATGGTTCTTGCCACTGATAGTTTTAGCAGTTCGAATCAAGTCGGCCGAGGAGGTTATGGAACCGTTTATAAAGGCACTCTACCTGATGAAACAATTGTTGCCATAAAGAGAGCACAAGAAGATTCCCTACAAGGAACAAGGGAATTCTTGAATGAGATTGAACTATTATCGAGGTTACATCATCGAAATCTAGTCTCCTTGATTGGATATTGTGATCAAGAAGGGGAGCAGATGCTTGTTTATGAATTTATGCCTAATGGCAACTTACGCGATTGGCTTTCAGGTATGAGAATGTAG 2493 0.3891 MHDVCYWDRGKTIKFSTSGSDISEASFPLQKVEEARCLLVFGIYFMILCWMSPLFKLYIQVLKTKQCCKLSLVLRKLVTVTTMSTTSTGTMIPNRRRIHGYVLAVSFCYLISTTVAQSTHPSEVNALLQIKKSLIDPLNHLWNWNKGDPCTSNWNGVLCPLNVGADGHFHVKELYLMTMNLSGNLVPQLGQLSQLEIMNFMWNNITGSIPREIGNITSLRLLLLNGNALSGNLPYELGNLQNLNRFQVDQNQLSGPIPPSFANLSSVKHMLVHFLTAFIRRLVHLLCFICLCSCSHMNNNSFSGQIPPNLSNLSNLLHLLLDTNNLSGYLPPEFSMLPQLRILQLDNNHFTGSRVPSSYANLSRLAKLSLRNCSLLGEVPDLSSIPQLYYLDLSWNNLIGPIPSKKLAENMTTIDLSNNNLNGSIPGYFSELPSLQRLSLENNNFSGSISAKIWQKMTLTTNAKLTIDLRNNSLSRILGDPSPPPNVTLRLGGNPICKSSQTSGILAKQCGFEGEEEDNYLTNSTTTCPPQACSVNDFFEYVPDSPIPCFCASPLRIGYRLKSPSFSFFPPYKASFRSYVTHALNLDFYQLSIDSYSWEEEETRLRMYLKLFPEASYSHNEFNSSEVYRMRSIFSSWNFGGSDFYGPYELLNFTLEGPYAYLIAKSEKSKSSRLEIIFAVVAAVAVVIAISAIVTLIILRRDIKNQDTFSRRRRSSSIPIKIDGVKEFTFKEMVLATDSFSSSNQVGRGGYGTVYKGTLPDETIVAIKRAQEDSLQGTREFLNEIELLSRLHHRNLVSLIGYCDQEGEQMLVYEFMPNGNLRDWLSGMRM 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02150 830 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 295 827 - -
Adu04g02150 830 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 102 270 - -
Adu04g02150 830 Pfam Protein tyrosine and serine/threonine kinase 743 826 IPR001245 GO:0004672|GO:0006468
Adu04g02150 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 295 827 - -
Adu04g02150 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 102 270 - -
Adu04g02150 830 ProSiteProfiles Protein kinase domain profile. 740 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02150 830 Gene3D Ribonuclease Inhibitor 120 276 IPR032675 -
Adu04g02150 830 Gene3D Ribonuclease Inhibitor 283 494 IPR032675 -
Adu04g02150 830 SUPERFAMILY Protein kinase-like (PK-like) 711 829 IPR011009 -
Adu04g02150 830 ProSitePatterns Protein kinases ATP-binding region signature. 746 768 IPR017441 GO:0005524
Adu04g02150 830 Gene3D Phosphorylase Kinase; domain 1 711 815 - -
Adu04g02150 830 Pfam Leucine rich repeat N-terminal domain 121 159 IPR013210 -
Adu04g02150 830 SUPERFAMILY L domain-like 134 498 - -
Adu04g02150 830 Pfam Leucine rich repeat 386 445 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02150 Adu-Chr4 102880914 102894725 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02150 96 827 Receptor kinase-like Gene Family AT5G01950 57.143 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Adu04g02150 PK_Tyr_Ser-Thr 2.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02150 - - lang:109325183 887.871