Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02144 ATGGTGAACGTTGAGGTTGAGCTTCTCTGTTTTTCTGTTAGCATTTGCAGGGACTTCTCTGACCTAACTTCATCCCCACCCTATCGACCTCCTTTCACATACACAAAATCACAGATCAAACGAGTTGTTCCTCTCTCCTTCAACGAGCTTCTCCATCGCGCACAAGCTATTTCTTCTCCTTTCCTCACTCACAGCGCCATCGCCGCCACCCTAACCACCGCAGCTACCTTCTCCTTCTTCTCCTCTCTTTTAAACACTAAACCAGTAGAACACAGCCCCTGTCTCTCTCGTTCTTTCTCGTTTTCAAAACAAATCAAGCTCAAGCTCCTGTTCTCTTCGTCTCAGGTAAGCTCCAGCACGTCGGCGCCACCTGTAGCAGCGTCTGTCCCTACCACTGCCGCACCTCTCTCTCTTTTTTTATCCCCACTCAGTTCTGGCTCGCATATCTTCTTAATGCCACAGCCATCATCTCCTCCAGTCAATACTTCTAGATCGAAAGAAAGCAAAAAGGAAAAGATGTTGAAGGTGAAGATGTATGCGGACCGCATGTCCCAACCATCTCCTATTAACCCTTTCAAGAAACTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTCGAGAGTCACGCAATTCTTATCTATCTTGCTTCTGCCTTTTCTGGTATTGCTAATCATTGGTTGTGTGGCCCTGGAATTGAACTCGCATCAGATCATGCTTCTGCTTCTGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTTAAGAAGGAACCTTGATGCTGTTGAGAGAGAAACACATAAGGAAGATCCTCTTCTCTTCCTCAACTCAATGACAGTTCTTGATTGCTTAATTGATCAAAGACTGTACATTGGTTTGCCTGATGCCAAGCAAAGAGTCCAAATTTTTGGTGTGCATAGTTCTGGAAAGCAACTTGCAAAGGATGTTGATTTTGAAAAGCTTGTCTTCCAAATTGTTGGATTCTCAGGAGCAGATATAAGAAACCTTGTGAATGAAGCAGCAATAATGATGGTATCTGTTGAAAAGAAGAGACTACCTGCTATTCATGAAGTTGGTCATATTGTGTTAGCTCACTTATTTCCTCGATTTGACTGGCATGCATTTTCGCAGCTCCTACCTGGTGATTCATCTGGTGCTGGATCTGCTTCTGAGATTAATGCTCAGTATTACCAGCAAGAAGTAGAAAAACTGTGTGCCCAAATTAGTAACCTGCAGAATAACAAATTTTGA 1248 0.4375 MVNVEVELLCFSVSICRDFSDLTSSPPYRPPFTYTKSQIKRVVPLSFNELLHRAQAISSPFLTHSAIAATLTTAATFSFFSSLLNTKPVEHSPCLSRSFSFSKQIKLKLLFSSSQVSSSTSAPPVAASVPTTAAPLSLFLSPLSSGSHIFLMPQPSSPPVNTSRSKESKKEKMLKVKMYADRMSQPSPINPFKKLPAIVDGRFKLFESHAILIYLASAFSGIANHWLCGPGIELASDHASASVDCVVARKNASLRRNLDAVERETHKEDPLLFLNSMTVLDCLIDQRLYIGLPDAKQRVQIFGVHSSGKQLAKDVDFEKLVFQIVGFSGADIRNLVNEAAIMMVSVEKKRLPAIHEVGHIVLAHLFPRFDWHAFSQLLPGDSSGAGSASEINAQYYQQEVEKLCAQISNLQNNKF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02144 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 283 345 IPR027417 -
Adu04g02144 415 Pfam Glutathione S-transferase, N-terminal domain 189 216 IPR004045 -
Adu04g02144 415 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 134 223 IPR004045 -
Adu04g02144 415 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 344 384 - -
Adu04g02144 415 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 283 344 - -
Adu04g02144 415 SUPERFAMILY FtsH protease domain-like 346 399 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu04g02144 415 Gene3D Glutaredoxin 158 222 - -
Adu04g02144 415 Coils Coil 393 413 - -
Adu04g02144 415 Gene3D - 293 411 - -
Adu04g02144 415 SUPERFAMILY Thioredoxin-like 184 218 IPR036249 -
Adu04g02144 415 PANTHER ATP-DEPENDENT PROTEASE 283 344 - -
Adu04g02144 415 PANTHER ATP-DEPENDENT PROTEASE 344 384 - -
Adu04g02144 415 Pfam AAA+ lid domain 314 342 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02144 Adu-Chr4 102782696 102798918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02144 173 226 Glutathione S-transferase Gene Family AT5G41210 47.674 8.48e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02144 K03798 - jre:109011253 157.532