Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02131 ATGAGTAACTACATTAACTCCATAAAGTGCAATGCATTCTTGGATAACATCATCCCAAAAGAGTTATTGTTGGAGTTGGACAACACTAGGAAAGTTCCAGAATGGATTTACTTAACTGCAAGGCCTTGTCTTCTTGTTGGAGCCATTGATGCATATCTTATGGCTCCAATTCAAATGGTTTTGGATAGTTTATTTGGAAGGAGAAGTCTCCAAAGGAGTGATCTTGTGATTGGAGATAAATTAGGAGAAGGGTCATTTGGTGTTGCTTATTCAGATGTTTTGGTCCCAAGGAATGTAAATAATGTAGAACAAGAGAGGATAAAGAAGAGTGGCAATAAGGGGAGGAATGTGATAACAAAGTTGGATACAAAATCTAAGGACAAAGTCATTCTTAAAAAGGTGAAAGTTGGAATTGAAGGAGCAGAAGAATTTGGTGAATGTGAGGAGTGGTTCAATTACAGACTCTGCAGAGCAGCTCCAGAAACGTGTGCTAGGTTTCTTGGAAGTTTTGTTGCTGATAAAAGCAATTCACTTTTCACAAAAGGCGGAAAATGGCTTTttccgcCACTGGTTATGATGACACAGAGTGGCCGTTCTCTTACCGACTACATGACGGATCGAAACTTCTCTTCAAACTTGGAATCTGTCATGTTTGGACGAGTCTTGCAAGGGATAGACTCGTCGAAAAGAGATGCCTTGATCATCAAGCAAATAATGCGCCAAATGATTATTTCGCTTAAGAAGATTCATGACTCGGGCATTGTTCACAGGGATATAAAGCCTGCCAACTTGGTGGTTACCAAGCAGGGACAGATCAAACTCATTGATTTTGGTTCAGCTACTGATCTGCGAATCGGAAATAATTATGTTCCCAATTTTACCCCTTTGGATCCTGACTATTGTCCCCCAGAATTGTATGTGCTGCCTGAAGAAACAACCAGTCTTCCTCCAGAGCCAGTTGCATCTTTTCGTTCACCAATATTGTGGCAGTTAAAAAGTCCTGATCTATTTGACATGTATTCTGCTGGGATTATACTCTTGCAAATGGCAATACCAACCTTAAGGTCTAAATCTGCTCTGAAGAATTTCAATTTGGAATTAAGGAACTGTGGATTCGACCTGAAGAAATGTCGGAGCTTTACTCGTAGCCGGTTTGATTTTCGAATCCTTGACGGGGATTCCGGTAGAGGTTGGGACTTAGCAACCAAGCTTATCTCAAAGAGGGATTCCCCGGCGAGTGGATGCTTATCGGCCGCGGCTACTTTGAGGCATCCTTATTTTCTTCTTGGTGGTGATCAGGCAGCTTTAGTCCTTTCAAAATTAAGCTTGAGCATAAAGTGA 1341 0.4101 MSNYINSIKCNAFLDNIIPKELLLELDNTRKVPEWIYLTARPCLLVGAIDAYLMAPIQMVLDSLFGRRSLQRSDLVIGDKLGEGSFGVAYSDVLVPRNVNNVEQERIKKSGNKGRNVITKLDTKSKDKVILKKVKVGIEGAEEFGECEEWFNYRLCRAAPETCARFLGSFVADKSNSLFTKGGKWLFPPLVMMTQSGRSLTDYMTDRNFSSNLESVMFGRVLQGIDSSKRDALIIKQIMRQMIISLKKIHDSGIVHRDIKPANLVVTKQGQIKLIDFGSATDLRIGNNYVPNFTPLDPDYCPPELYVLPEETTSLPPEPVASFRSPILWQLKSPDLFDMYSAGIILLQMAIPTLRSKSALKNFNLELRNCGFDLKKCRSFTRSRFDFRILDGDSGRGWDLATKLISKRDSPASGCLSAAATLRHPYFLLGGDQAALVLSKLSLSIK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02131 446 Gene3D Phosphorylase Kinase; domain 1 62 188 - -
Adu04g02131 446 SUPERFAMILY Protein kinase-like (PK-like) 72 353 IPR011009 -
Adu04g02131 446 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 34 444 IPR044803 GO:0004674|GO:0009579
Adu04g02131 446 Pfam Protein kinase domain 231 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02131 446 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 34 444 - -
Adu04g02131 446 Gene3D Transferase(Phosphotransferase) domain 1 224 429 - -
Adu04g02131 446 ProSiteProfiles Protein kinase domain profile. 75 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02131 446 SMART serkin_6 75 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02131 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02131 Adu-Chr4 102509098 102512472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02131 241 427 AGC Kinase Gene Family AT3G10540 28.646 2.31e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Adu04g02131 Pkinase 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02131 - - gmx:100795624 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02131 04 102509098 102512472 Adu04g02131 04 102509098 102512472 ECH
Adu04g02131 04 102509098 102512472 Adu02g00561 02 7375943 7378688 PCT