Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02128 ATGGAGGTGTCTTTGAGCCAGGAGGATGCTGATCGTGGAGGGAGTGATGGTGATGCTTACGATGTAGAAAATTCTGAGTTGGAAGACCTTGCCGGACTAAGCGTGAATGACATCCTTAAGAAGGTATGGGACAACATTGATAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGCATGGATTCGGTGTGCGAAAGGGTGACTCCGAAAAAGACCGTGAGGGGAATCTTGTAAGGTACAGGTTTTTTTGTAACAAGGAATGCTCCAGGGAGCGTAAACACTACGACAGGGTTGACAGAATGAGGGTACACAAACCAGAAATAATAACTAACTGCAAAGCAATGTTATCGGTTTATTTAGACAAAAATGATAAGTATTGGAAGGTTAGGAAGTTAGTAACCGAACACAATCACGACCTAACACCGACAGGAATGGTGCACTTGATTGCCAATCATCGTCGGTTAACGGAAGTTGCAAAGAGTCAGATAGTTGGGATGCAAGCACATGGTATTGCGACCTTTAAGATTGTAGGGTACATGGCTGGTATGGCCGGGGGATATTTGTTGTTGGGGTTCCTGATGAAGGATGTCTATAACTATGCTGACAAAATGCGGTGCATTAAAATATCTGATGGCGATGCGAATTCTGCATTAGATGATGATTTACGTGGGCTGTTCATAAGGTGGTTGTACGTGGACATGACGACAGATGTATTTAAGTCGGAATGGGAGCAGGCTGCCGAGGACTATGGCCTCTGCCAGAAGCGGTGGTGGTGCCAGATGTATGAGAAAAAGGAGATGCGGGCAAGTGCTTATCTCCGTGACAAGTTCTGCGCGGGGTACCGAACCACATCCCGCTGTGAAGGAATTAACGCATATGTAATCAAGTTTTCCAAATTCAGCCACACAATTTTGGAGCTGGTGCAATGCTTAGATATGGTTGCCCGTGAATATCGAAATAAGGAAATGCTTCTCTAG 978 0.4499 MEVSLSQEDADRGGSDGDAYDVENSELEDLAGLSVNDILKKVWDNIDNAYEFYRGFGKLHGFGVRKGDSEKDREGNLVRYRFFCNKECSRERKHYDRVDRMRVHKPEIITNCKAMLSVYLDKNDKYWKVRKLVTEHNHDLTPTGMVHLIANHRRLTEVAKSQIVGMQAHGIATFKIVGYMAGMAGGYLLLGFLMKDVYNYADKMRCIKISDGDANSALDDDLRGLFIRWLYVDMTTDVFKSEWEQAAEDYGLCQKRWWCQMYEKKEMRASAYLRDKFCAGYRTTSRCEGINAYVIKFSKFSHTILELVQCLDMVAREYRNKEMLL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02128 325 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Adu04g02128 325 PANTHER OS03G0181600 PROTEIN 27 218 - -
Adu04g02128 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 238 322 IPR031052 GO:0006355
Adu04g02128 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 218 IPR031052 GO:0006355
Adu04g02128 325 PANTHER OS03G0181600 PROTEIN 238 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02128 Adu-Chr4 102489229 102490641 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g02128 FAR1 9.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02128 - - adu:107485326 435.647