Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02124 ATGGAAGATGTAGATGATAGCTCAGGTGGTTCTACTCTGTGTCCGCCAACCGGCCGGATAGAGGAGAATTCTAGTGTCATTCTAGTGGGTCAACAGGTTACTTCCTACGTGTTGTTCCCGTCATTTGCAGCAAATTTTCTCGTTCAGGCATATGATGCGGATAACTTAGTTGATGCACTGATGTGTGTGCCTTTGTGGAACTTGCAATTTTTTGGAGGTAAAGACACGTACTCCACAATGAATAGTGATCCCTCCATTAGGATGAAAATGCAATCCCTAAATCCTACGCATTGGCTTATGTATAAAGATCCTCCAAAAAATTGTCCACCACCAGTGTTCCCACCAAAAACACCCAATTCTGCAGTTTCGCAGGGTGATAGAATTCATGGAACAATATGTAAGCCTGGCTTGGATTTATTCAGGGAGAGGGTAAAAGAGCATGCCGTGTATAGGATGCGGAATTTTATTGTCAAAATTAACAATGGGAAGGTAAGGACAACTGCTCATAAGTACAAGCTTAGCTTCTATACAAAGACAGAGGTGGAAGTCCTTCCAATCGAGAAATTCGCTTTTAATCCATTCAAATTTTGCCCCTTTGCTGAACTTGAGTCAAATGCTCCAATGGATGGCAATTTGTTGTTTGATTACATAGGAGAGGTTGTTGCAAAGGAAGAGGCTATGGGGATGATTACACGCACGAAGTTGTATTATGCCTTTCGTTCTAGGAAGCACAAGATTAAATGTACATTGTTTGGAGAATTGGTGGACCAAGTGCTTCCACACCTCGAGCGAGATGATGGGGAGCCTTTCATAATGGTTGTTCAGCTATTTAAATCGAATGTGTATTTAAACTTTGTGAATGTTCAGAGCACTTACTATGTCTCCAAATATTACTTCAATCTAAACCTTCTCGAAGTTATTGACTTCAAGAAAAGATTGGCCGAGGAGGTTGTGCCCTGTTCACAACGGATAACTCCTCTTCAATCGCAGCCTCAATACTCTGTGGCAGATGAAATCAATGCAGGCATTGTCCCAATATGCACCATAGAGGAGGTTCTTAATATGACACAGGAAACCTCTTGCTGGATTGTGGGAAACGTTGTGTCTTTAGAGGTCGGTAAAGATGACTGGTCCTATACATCATGCAAGACATGTCCAAAGAAAGTTCTAGAGAGCAAAGATAGGTACTGGTGTGATCATTGTAGGCGTGTAGGCTTCAAGGCTATGCTAAGGTATAGGCTACAAATAATCATGACTGATGGAAGCGGATGTATGAAGCTCCTTTTATGGAACAAAGAAGTAGAGAAAACTGTGGGAAAGGCTGTTGAGAAAATTAAGGAGTTATCTAAGTGGGAAAAAGGTGAGTCGTATCCTAAGTCCTTGGATACTATTGTTGACAAAAGGTTCTTATTCAAACTCAATATCACCTATAAGAATATTAATGCTGTTGAAGGGGTATACAACATTTTAAAGATTTCAGATGATGAATACCTCATGTCCATTTTTGGTTCTGCCAATTCTTCTTTCAATGCTTCTGTTTCAATGCTTCTTGCTCTGAACATGTACCTAATATCTCTACAACTAAAACAGGATTCAGCAGTTGAGAGCAATTGTGATAGCTCCTATGAGACTCCAGCCAAGAGGTCATCTTCTGATATGGGTGATGGCTCGACAGCAGAAGGAGTTGTGTCGATAGATGTGCAAGCATCAGCTAACAAGACTTTTAAGAGGAATTGTGGAAAAAAAGCTGGATTGAAAACTTTTCTGTTAGTTATAGTGTTGGTCGGCAATGGAACATCTGAAGGAACATGTGATGGAAGAAACATGATTAACATACCTCCTGAATTGCTTATCACTAATTATAATGATCCTATACAGGCAATGATTGAAGCAATCTATTCTGATTACATTGCTGACATGGCTAACGAAAGCCACTTGAAAGGTCGAGCTATTTTAGCTCCTACAATTCATGTTGTAGATGAGGTAAATGATTACATGACTGCAATGAACAACAATCAATGCAGGACCTATCTTAGTTCCAATAAGTCTCTGTCCGAAGGAGGTAGCAATGAAATTGAAGGCATCCACACACCAGAATTTTTAGCAACACTTAGGTGCTCAGGGCTTCCAAATCATGAATTGAAGCTAAAGGTCGGTTGTCCTGTTATGCTTATCAGAAACATTGATCACTTATCAGGGCTTTGCAACGGTACCAGGTTGATAATTACAAGACTTGGGGATGAAGTTATCGAGGCAAAGTTGTTGAATTCTAACCACTGTCTCGATAAGGTCTTCATTCCTAGAATGACACTCACACCATCATATGTAAGGATACTgtttcgagggtttacctga 2355 0.4 MEDVDDSSGGSTLCPPTGRIEENSSVILVGQQVTSYVLFPSFAANFLVQAYDADNLVDALMCVPLWNLQFFGGKDTYSTMNSDPSIRMKMQSLNPTHWLMYKDPPKNCPPPVFPPKTPNSAVSQGDRIHGTICKPGLDLFRERVKEHAVYRMRNFIVKINNGKVRTTAHKYKLSFYTKTEVEVLPIEKFAFNPFKFCPFAELESNAPMDGNLLFDYIGEVVAKEEAMGMITRTKLYYAFRSRKHKIKCTLFGELVDQVLPHLERDDGEPFIMVVQLFKSNVYLNFVNVQSTYYVSKYYFNLNLLEVIDFKKRLAEEVVPCSQRITPLQSQPQYSVADEINAGIVPICTIEEVLNMTQETSCWIVGNVVSLEVGKDDWSYTSCKTCPKKVLESKDRYWCDHCRRVGFKAMLRYRLQIIMTDGSGCMKLLLWNKEVEKTVGKAVEKIKELSKWEKGESYPKSLDTIVDKRFLFKLNITYKNINAVEGVYNILKISDDEYLMSIFGSANSSFNASVSMLLALNMYLISLQLKQDSAVESNCDSSYETPAKRSSSDMGDGSTAEGVVSIDVQASANKTFKRNCGKKAGLKTFLLVIVLVGNGTSEGTCDGRNMINIPPELLITNYNDPIQAMIEAIYSDYIADMANESHLKGRAILAPTIHVVDEVNDYMTAMNNNQCRTYLSSNKSLSEGGSNEIEGIHTPEFLATLRCSGLPNHELKLKVGCPVMLIRNIDHLSGLCNGTRLIITRLGDEVIEAKLLNSNHCLDKVFIPRMTLTPSYVRILFRGFT 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02124 784 Pfam Replication factor-A C terminal domain 372 481 IPR013955 -
Adu04g02124 784 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 645 758 IPR027417 -
Adu04g02124 784 PANTHER DNA HELICASE-RELATED 586 779 - -
Adu04g02124 784 CDD RPA1_DBD_A_like 123 181 - -
Adu04g02124 784 Pfam Domain of unknown function DUF223 124 182 IPR003871 -
Adu04g02124 784 SUPERFAMILY Nucleic acid-binding proteins 125 185 IPR012340 -
Adu04g02124 784 Gene3D - 337 501 IPR012340 -
Adu04g02124 784 Pfam PIF1-like helicase 580 745 IPR010285 GO:0000723|GO:0003678|GO:0006281
Adu04g02124 784 CDD RPA1_DBD_C 374 498 IPR013955 -
Adu04g02124 784 SUPERFAMILY Nucleic acid-binding proteins 345 497 IPR012340 -
Adu04g02124 784 PANTHER ATP-DEPENDENT DNA HELICASE 586 779 - -
Adu04g02124 784 Gene3D - 189 319 IPR012340 -
Adu04g02124 784 Gene3D - 122 184 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02124 Adu-Chr4 102408021 102418752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02124 124 482 Core DNA Replication Machinery Family AT5G08020 24.339 9.27e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02124 - K15255 adu:107463979 675.626