Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02123 ATGGAACTGCATGATGCCACCACCAATAGTAGTAGCACTAGTGTGCCCTTTGAAATCTCAGGTTCTTCTTCACAACAGCATGTAGTTCATCATGATAATAGGTTGAGTAGTAATCACAATAATTATAGTAAGCCTCAGAGGGTTAGGCACAAGAGCAGCGTGCAGTTTGATGATGCTTTGTTGCATGATGATAGTGCTAGGTTGATATATATTAATGATCCTAAGAGGACTGATGATAAGTGTGAGTTGCCGGGGAATGAGATCAGGACTAGTAAATACACAATTGTTACCTTCTTGCCTAAGAATCTTTTTATTCAGTTTCATAGGGTTGCTTATTTGTATTTCCTTGCTATTGCGGCTCTCAATCAGCTTCCTCCCTTGGCCGTATTTGGGAGGACTGTGTCACTCTTCCCGCTGTTGTTTGTGCTCTGCGTCACTGCTATTAAGGATGGATATGAAGACTGGCGGCGGCACAGGTCGGATCGCAATGAGAACAACCGGGAATCATTGGTGCTTCAGCGTGATGATTTCCGGCCAAAGAAGTGGAAGAATATACAAGCTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACGATTCCAGCTGACATGGTCTTGCTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAGTCGAATTTGAAGACTAGGTATGCTAAGCAGGAAACAACTGCTGCAGTTTCTTCGGAAGCTTGTCGTGTTTCTGGGGTTATCAGATGCGAGCAGCCTAACCGGAATATTTATGAGTTCACGGCAAACATGGAGTTCAACGGACTTAAGTTTTCGCTTAGCCAGTCTAACATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGATTGGATCATTGGTGTTGTGGTTTATGCCGGACAAGACACAAAAGCAATGATGAACAGCACACCTTCTCCTTCTAAGAGAAGCAAACTTGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTCATCATGTGTTTAGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTGCGGCACAACAGCCAGCTTGATACCTTGCCTTACTACAGAAAACGATACTTCAACAATGGGCCAGATAATAGAAAGAGATACAAGTATTATGGGATACCAATGGAGGCATTTTTCTCCTTCCTGAGTTCCATTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACGATGGAATTGGTTCGTTTGGGCCAGTCATACTTCATGATTGAAGATGGGGATATGTATGATGCTAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACCGAAAACAAAATGGAATTCCAGAGAGCTAGTGTATATGGGAAGAATTACGGGAACTCGTTGGTCGTGGCTGATGATACAGCTGCACCTGTTATTCCTAGACGGAGATGGAAGCTCAAATCTGAAATCAGAGTTGATTCTGAACTGCTGACAGTGTTGCAGAGCGAATCACATGGAGATGACAGAATTGCTGCACATGAATTTTTTCTTACATTGGCAGCTTGCAATACTGTGATCCCTATTCCTACTGGTGGTACATTCTCCAGTCCTGGAACAAGTGAATCAGATGAAGATATGGAAGGTATTGAGTACCAGGGAGAATCCCCTGATGAACAAGCTCTAGTCTCTGCTGCTTCTGCATATGGATATACCCTTTTTGAGCGAACATCCGGACACATTGTTATCGACGTCAATGGTGAGAAGCTCAGATTGGACGTATTGGGCCTACACGAGTTTGATAGTGTGCGCAAGAGGATGTCTGTTGTTATTCGTTTTCCCAACAACGTTGTAAAGGTGTTGGTCAAAGGTGCTGATACTACAATGTTTAGCATTTTAGCAAATGACAGTGAGAGCCACAATACCATACGAGATGTAACACAGAGTCATCTGAATGAATATTCTTCACTAGGTCTGCGCACTCTTGTAGTTGCATCTAGAGATCTTTCAGATGCTGAACTTGAAGAGTGGCAAAGCATGTATGAAGAGGCCAGCACTTCTTTGCATGAAAGAGCTGCTAAACTACGTCAAACAGCAGCGTTTATAGAATGCAACTTAAAGCTACTTGGAGCAACGGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAGGAGACAGCAATTTCAATTGGTCTCTCTTGCAAACTTCTCACTGCAGATATGCAACAGATTATTATAAATGGCACTTCAGAGGCTGATTGTCGTAATCTTTTGGGTGATGCTAAAGCTAAATATGGCGTGAGGTCTTCAAGTAATCAGAATCGGAAACAAAAATCCAATGCTGGACTTGGTGATCTTGATATTCCCAATGGTTCGAAGTCATTGAGTTTGCCTAAGTGGAATCCAGGACAGGAAGAAGGAATTACTGCTCCATTGGCACTCATAATTGATGGGAACAGTTTGGTGTATATTTTGGAGAAGGAATTAGAGTCAGAGCTTTTCGACCTGGCAACTTCCTGTAGGGTTGTCTTGTGCTGCCGTGTTGCTCCTTTGCAGAAAGCTGGAATTGTTGCTTTGATAAAGAGCCGCACGGATGATATGACACTGGCAATTGGTGATGGGGCCAATGATGTGTCGATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCGGTGATGGCATCAGATTTTGCAATGGGGCAATTTCAGTTCTTGAAAAAATTACTCCTGGTTCATGGGCACTGGAATTATCAGCGTGTGGCTTACTTAATTCTGTACAACTTTTACCGCAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCTACAACATCTGCGTTGACAGATTGGAGTAGTGTATTCTATTCTGTGATATACACATCTGTACCTACCATTTTTGTTGGTATTCTGGACAAAGACTTGAGCCATAGGACACTCTTGAAGTATCCGAAGCTGTACACTGCTGGTCACAGGCAAGAGGCATACAATTTGCACTTATTCTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTCTACACTCCTTTGTTCACATACAAGGATAGTGCGATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCGGTTGTTATTCTTGTGAATGTACACCTGGCCATGGACATCAACCGTTGGGTATTAATTACTCATGCTGCTGTATGGGGATCAATAATCATTACATATGGTTGCATGATAGTCTTGGATTCAATACCTGTCTTTCCCAATTACTGGACTATTTATCAGCTGGCAGTGTCCCCTACATATTGGATAACCATTTTGCTTATAATTATCGTAGCGCTGCTCCCTCGCTTTACTTGCAAAGTTGTTTGCCAAATCTTTTGGCCTTCAGATATCCAGATAGCCAGAGAAGCTGAGCTACTGAGAAAACGACATAATCATGTGCAGTCGAGGCAACAAGTTTCCAGTTAA 3603 0.4258 MELHDATTNSSSTSVPFEISGSSSQQHVVHHDNRLSSNHNNYSKPQRVRHKSSVQFDDALLHDDSARLIYINDPKRTDDKCELPGNEIRTSKYTIVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQRDDFRPKKWKNIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETTAAVSSEACRVSGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQDTKAMMNSTPSPSKRSKLESYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHNSQLDTLPYYRKRYFNNGPDNRKRYKYYGIPMEAFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVYGKNYGNSLVVADDTAAPVIPRRRWKLKSEIRVDSELLTVLQSESHGDDRIAAHEFFLTLAACNTVIPIPTGGTFSSPGTSESDEDMEGIEYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNVVKVLVKGADTTMFSILANDSESHNTIRDVTQSHLNEYSSLGLRTLVVASRDLSDAELEEWQSMYEEASTSLHERAAKLRQTAAFIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEADCRNLLGDAKAKYGVRSSSNQNRKQKSNAGLGDLDIPNGSKSLSLPKWNPGQEEGITAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVALIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVAYLILYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIFVGILDKDLSHRTLLKYPKLYTAGHRQEAYNLHLFWITMIDTVWQSLVLFYTPLFTYKDSAIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHAAVWGSIIITYGCMIVLDSIPVFPNYWTIYQLAVSPTYWITILLIIIVALLPRFTCKVVCQIFWPSDIQIAREAELLRKRHNHVQSRQQVSS 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02123 1200 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 1173 IPR023298 -
Adu04g02123 1200 CDD P-type_ATPase_APLT_Dnf-like 85 1066 - -
Adu04g02123 1200 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu04g02123 1200 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 876 992 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu04g02123 1200 MobiDBLite consensus disorder prediction 1 48 - -
Adu04g02123 1200 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 60 1198 - -
Adu04g02123 1200 Pfam Phospholipid-translocating ATPase N-terminal 69 134 IPR032631 -
Adu04g02123 1200 SFLD Haloacid Dehalogenase 440 957 - -
Adu04g02123 1200 SUPERFAMILY HAD-like 443 950 IPR036412 -
Adu04g02123 1200 SUPERFAMILY Calcium ATPase, transduction domain A 167 309 IPR008250 -
Adu04g02123 1200 Pfam Cation transport ATPase (P-type) 569 645 - -
Adu04g02123 1200 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 84 1181 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Adu04g02123 1200 Pfam E1-E2 ATPase 171 414 - -
Adu04g02123 1200 Gene3D - 142 312 - -
Adu04g02123 1200 Gene3D - 721 946 IPR023214 -
Adu04g02123 1200 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 60 1198 - -
Adu04g02123 1200 PRINTS P-type cation-transporting ATPase superfamily signature 456 470 - -
Adu04g02123 1200 PRINTS P-type cation-transporting ATPase superfamily signature 906 925 - -
Adu04g02123 1200 Pfam Phospholipid-translocating P-type ATPase C-terminal 934 1174 IPR032630 -
Adu04g02123 1200 ProSitePatterns E1-E2 ATPases phosphorylation site. 458 464 IPR018303 -
Adu04g02123 1200 Gene3D - 567 702 IPR023299 GO:0000166
Adu04g02123 1200 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 462 737 IPR023299 GO:0000166
Adu04g02123 1200 MobiDBLite consensus disorder prediction 803 825 - -
Adu04g02123 1200 SFLD p-type atpase 440 957 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02123 Adu-Chr4 102365504 102374119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02123 19 1185 Primary Pumps ATPases AT5G04930 55.915 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02123 K14802 - gmx:100812459 2029.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02123 04 102365504 102374119 Adu04g02123 04 102365504 102374119 ECH
Adu04g02123 04 102365504 102374119 Adu02g00559 02 7369221 7373896 PCT