Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02105 ATGGCTCCTTGTTCAGCAAGAAAAGAGAAAGTGCCACTAACCGCCGTGGCACTCACCTTCTTGTTGATTCTTCTCCTTGGAAACTTTACTTCTATGGCCTCTGCTTCTGGCAATTGCGGTTCGGAAGGCTCAACATGCCTCGTGCCTTCTGAGTTCGTCGGTGTTGTTAAGGAAGTTATTGGGCTTTTGGGAAATGTTGGTTCCATCCTGTCCAAGTTTACCGGTGGTTTTGGTAATTTCCATCTCACAAACGCCATTCTTGACGGTCTTAATTTGTTGGACATGTCCTCCGATGAACTTAATTTGTTTCTCTCCGTCATTCAAAATCCCAAAGGGAGAAACAACTTAGAATTGGATTTAGCGACATGGCTAAGTGCTGTCCTAGCAAATTTAGACACATGCCTCGATGGATTCGAAGGCACAAATAGTATCATCAAAGGGTTAATCTCCCCTGGCCTTAGACTAGTGACATCGCCAGTAACGAATCTTCTCGCAAAGGTTGATGTGTCCCAGAATGATTTCTTCGAAGATGCTGAGGCCGGCGCCGGCGAGGGCCGATTTCCTTCGTGGGTGAAGCCGAGGGAGAGAAAGCTTCTGCAAGCAAATAGGGTGGTTCCGAACGCCGTGGTAGCTGCAGATGGGAGTGGAAACTTTAGAAGAATCATGGATGCGGTTATGGCAGCGCCGAATAATAGTAATACGAGGTTTGTGATTTACGTGAAGAGAGGTGTTTACAATGAGTACGTAGAGATTAATAAGAATAACAGGAATATCATGATGATCGGAGATGGTATCGGTGCCACTATTATCACCGGCAACCGGAATTATGTCGACGGCTGGACAACTTTTCGATCGGCCACCTTTGAATTCAATGAGTACTTCGGCTACCAAGACACCCTTTACGTTCACTCAATGCGTCAATTCTTCAGAGAGTGCACCATTTCCGGTACAGTCGATTTCATCTTCGGCTATGGAACTGCCGTCTTCCAAAAATGCAACATACTTATCAAAAAAGGGTCACCGGACCAAAAGAACGCAATCACTGCACACGGCAGAGAAGATCCTAACGAACCAACAGGGTTCTCGTTGCAATTCTGCAACATAATCGCTGACTCTGACCTTGTTCCGTTTGTTAAGACGACGGAATATTTCTTGGGGAGGCCATGGAAAAAGTATTCAAGAACAGTTTTTATGCAAAATTATATAAGCGACGTTATAAGCCCGCTAGGTTGGACACCATGGAATGGGAGCATTGGGTTGGACACTCTGTATTATGCTGAGTATATGAACACTGGTCCCGGTGCCGGTGTAGCTAACAGAGTGAAATGGCCTGGATACCGTGTTTTGAAAACCTCCCGTGAAGCTAGTAATTTTACTGTGGCAAACTTCATTCAAGGGAACTCATGGTTGCCTTCAACTGGTGTCGCATTTTCAGCTGGATTATCTGTTTAA 1452 0.4545 MAPCSARKEKVPLTAVALTFLLILLLGNFTSMASASGNCGSEGSTCLVPSEFVGVVKEVIGLLGNVGSILSKFTGGFGNFHLTNAILDGLNLLDMSSDELNLFLSVIQNPKGRNNLELDLATWLSAVLANLDTCLDGFEGTNSIIKGLISPGLRLVTSPVTNLLAKVDVSQNDFFEDAEAGAGEGRFPSWVKPRERKLLQANRVVPNAVVAADGSGNFRRIMDAVMAAPNNSNTRFVIYVKRGVYNEYVEINKNNRNIMMIGDGIGATIITGNRNYVDGWTTFRSATFEFNEYFGYQDTLYVHSMRQFFRECTISGTVDFIFGYGTAVFQKCNILIKKGSPDQKNAITAHGREDPNEPTGFSLQFCNIIADSDLVPFVKTTEYFLGRPWKKYSRTVFMQNYISDVISPLGWTPWNGSIGLDTLYYAEYMNTGPGAGVANRVKWPGYRVLKTSREASNFTVANFIQGNSWLPSTGVAFSAGLSV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02105 483 PANTHER PECTINESTERASE 295 481 - -
Adu04g02105 483 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 295 481 - -
Adu04g02105 483 SMART PMEI_2 30 166 IPR006501 GO:0004857
Adu04g02105 483 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 90 165 IPR035513 -
Adu04g02105 483 Pfam Pectinesterase 294 467 IPR000070 GO:0030599|GO:0042545
Adu04g02105 483 Pfam Pectinesterase 207 289 IPR000070 GO:0030599|GO:0042545
Adu04g02105 483 Pfam Plant invertase/pectin methylesterase inhibitor 86 146 IPR006501 GO:0004857
Adu04g02105 483 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Adu04g02105 483 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 169 IPR035513 -
Adu04g02105 483 Gene3D - 293 483 IPR012334 -
Adu04g02105 483 SUPERFAMILY Pectin lyase-like 207 480 IPR011050 -
Adu04g02105 483 PANTHER PECTINESTERASE 47 289 - -
Adu04g02105 483 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 47 289 - -
Adu04g02105 483 ProSitePatterns Pectinesterase signature 2. 314 323 IPR033131 -
Adu04g02105 483 CDD PMEI-like_4 32 165 - -
Adu04g02105 483 Gene3D - 201 292 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02105 Adu-Chr4 101865200 101868077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02105 14 481 Carbohydrate Esterase AT3G43270 51.257 1.31e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02105 K01051 - rcu:8259027 515.383