Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02101 ATGGTTATTACGGAGAATATTAGTAATGGTAATAATTTATTGGGTCGTAGGAAGGCAATTGAGGAGCTTGAGAAGGGTCGTGAATTTGCAAACAAGCTTAGGGTTGTGATCAGTGGTGGTGAAGGGGGTGTTGATGGTGAACAACTTGTGGAGAAGGTTCTTATGTCATTCACAAACTCACTCTTGATCTTGAACAAGAACACTGGTTCTAATAATTGTGATGAGGTCTATGATGTTCCTTCTTCATGTGGGATCAATCCAACCAAGTCTGAGGATTCACTTGAGAGTAATTGCAAGAGCTCCGTTCATAAAGAACGTAGAGGGTGTTACAAGAGAAGAAGGACTTCACAAGTATTGGAGAAGGAGTCTGAAGCTCCAATTGATGATGGTCATCAGTGGAGAAAGTATGGCCAAAAAGTTATCCTTAATACCAAACATCCAAGGAACTATTACAGATGCACTCACAAATATGACCAAGGTTGTCTAGCAACAAAACAAGTGCAACAGGTTGAAGATGAACCAACACTTTACAAGACCACATACTATGGAAACCACACTTGTAGGAACAACCTGAACCCTACAATCATATTGGATGAATCCAATGATTCTCCTTCACAATCTTCAATAAACGGCGTCGTCAAGGCTGGATTGAATTTCCGTAAAACTGGCTCCCATTCTCCTTTGTCATTTACGCTTTACCCTAACCCCACAAACCCTTCATCTTCATTCCCTTCAAAAACTATATTTGACATTGACGACATGCGAGTTAAGGCTATGGAGAGTGGAGCAAGGACAAGTGGGTCAGCTACAAAGAATTTAGGGAGTAATGTTCAAGACTTAGTGGGTCAGGTGCAAGTGGAGTCGGACCTGGTGCAGGAGTTGAGCCTCGCTCTAGTAGTGGCCTGGCTAGTTGGAGGCTCAGGTCAGGCAAACATAGATACTACAGATGTCAGTGATGAACCCTTGGTCAACTCAGTGTCCACTGTGATTCAATCTAAAGTTCTTAAGGTTGCAATGGCAAACATTGGCATAAGGTTTAGGCCAAAGCAAACGATATCTAGGCCCCCAGCCCCACCAGTAATACAGCAACATGCAAATACCACCATTCCACAACCTCAATCTAATGCAAACCCTACTCAAGGCCCAAGATCTCATCGTGTACAACTTAACATCAGTGGTGAAGCCATTTTACGGAGACAATAG 1203 0.4281 MVITENISNGNNLLGRRKAIEELEKGREFANKLRVVISGGEGGVDGEQLVEKVLMSFTNSLLILNKNTGSNNCDEVYDVPSSCGINPTKSEDSLESNCKSSVHKERRGCYKRRRTSQVLEKESEAPIDDGHQWRKYGQKVILNTKHPRNYYRCTHKYDQGCLATKQVQQVEDEPTLYKTTYYGNHTCRNNLNPTIILDESNDSPSQSSINGVVKAGLNFRKTGSHSPLSFTLYPNPTNPSSSFPSKTIFDIDDMRVKAMESGARTSGSATKNLGSNVQDLVGQVQVESDLVQELSLALVVAWLVGGSGQANIDTTDVSDEPLVNSVSTVIQSKVLKVAMANIGIRFRPKQTISRPPAPPVIQQHANTTIPQPQSNANPTQGPRSHRVQLNISGEAILRRQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02101 400 MobiDBLite consensus disorder prediction 349 387 - -
Adu04g02101 400 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 244 IPR044810 GO:0003700
Adu04g02101 400 ProSiteProfiles WRKY domain profile. 122 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02101 400 Gene3D WRKY domain 112 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02101 400 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g02101 400 Pfam WRKY DNA -binding domain 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02101 400 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g02101 400 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 13 244 - -
Adu04g02101 400 MobiDBLite consensus disorder prediction 356 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02101 Adu-Chr4 101655618 101662642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02101 12 208 WRKY Transcription Factor Family AT3G56400 38.863 1.28e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g02101 WRKY 4.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02101 - - ahf:112797210 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02101 04 101655618 101662642 Adu04g02101 04 101655618 101662642 ECH
Adu04g02101 04 101655618 101662642 Adu02g00558 02 7355481 7357070 PCT