Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02075 ATGCAATTGCAACGGCGTGTTCTCGAAACAGGGTTAAGCATTTCACCATCTTCTTCATCATCTTCTTCTTCTTCGATCATCAATGAAGCGAACTTCGACACCAACATGGTGATAATCCTGGCGGCGCTAATGTGCGCACTGGTGTGCGCCTTGGGTCTGAACTCCATAGCACGGTGTGCGCTCCGGTGCGGACGGAGGCTGACGGCGGAGCAAGAGGCGGAGAGGCTGGCGACGACGGGGCTCAAGAAGAGCCACCTGAGGAGGATTCCCGTGGCGGTGTACGGCTCCGGCGAGAATATTCCAGCGACGGAGTGCCCAATATGTTTGGGTGAGTTCGAGAGAGGGGATAAAGTTAGAATGCTTCCTCAGTGTAACCACGGGTTTCACGTGAAGTGTATTGACACGTGGCTCGTTTCGCATTCGTCTTGCCCTAATTGCCGACACTCCTTGCTTGAAGACTCGGCTCGGCTCGGCTCGGCTCAACTCGGCTCCATTCTACATTTGTGGTTGGCTCTTTGA 519 0.5453 MQLQRRVLETGLSISPSSSSSSSSSIINEANFDTNMVIILAALMCALVCALGLNSIARCALRCGRRLTAEQEAERLATTGLKKSHLRRIPVAVYGSGENIPATECPICLGEFERGDKVRMLPQCNHGFHVKCIDTWLVSHSSCPNCRHSLLEDSARLGSAQLGSILHLWLAL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02075 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 152 IPR013083 -
Adu04g02075 172 MobiDBLite consensus disorder prediction 1 25 - -
Adu04g02075 172 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 4 156 - -
Adu04g02075 172 SMART ring_2 105 146 IPR001841 -
Adu04g02075 172 CDD RING-H2_PA-TM-RING 104 147 - -
Adu04g02075 172 SUPERFAMILY RING/U-box 91 153 - -
Adu04g02075 172 Pfam Ring finger domain 104 147 IPR001841 -
Adu04g02075 172 PANTHER RING-H2 FINGER PROTEIN ATL74 4 156 - -
Adu04g02075 172 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02075 Adu-Chr4 101142556 101143443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02075 15 151 C3H Transcription Factor Family AT3G10910 57.718 6.08e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02075 K19040 - gmx:100814602 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02075 04 101142556 101143443 Adu04g02075 04 101142556 101143443 ECH