Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02065 ATGAGTTTCAGAGAAGAATCGGTTCCGGAAAGCACTGAGTCAAAATCAGTGAAGCAAAATGGGTTCATAACAGATACTCAGTTAACAATCGATGAGAGCCTTTTGGTTGATCCAAAACTTCTGTTTATAGGGTCCAAGATTGGTGAGGGAGCTCATGGTAAAGTCTATGAAGGAAGGTATGGAGAGAGAATTGTTGCAATCAAAGTTTTAAATCGTGGGAGCACTTCTGAAGAAAGAGCTGCCCTTGAAAATCGGTTTGCTCGGGAAGTTAATATGATGTCTCGTGTCCATCATGAGAATCTTGTTAAGTTTATTGGAGCTTGTAAGGATCCTTTGATGGTGATCGTTACAGAATTATTGCCTGGGATGTCACTGAGGAAATACTTAACAAGTATCCGTCCGAAGTTACTAGACCTTCATGTTGCTATAAACTTTGCCCTTGATATTGCTCGGGCCATGGATTGGCTACATGCCAACGGGATCATACATAGAGATCTGAAGCCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTCGCAAGAGAAGAATCCGTGACTGAAATGATGACAGCAGAAACCGGAACTTACCGATGGATGGCACCAGAGTTGTATAGTACCGTGACATTGCGCCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTATAGCTTTGGTATTGTTTTGTGGGAGCTACTAACAAACCGCATGCCTTTCGAAGGGATGTCGAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAGCATGCCTGAAGATATATCCCCGGATCTCGCCTTCATCATACAATCATGCTGGGTTGAAGATCCTAACCTGAGACCGAGTTTTAGTCAGATCATTCGCATGCTCAATGCATTTCTCTTCACGCTTTCGCCACCGTCTCCTCCCATGCAAGAGCCTGATGAAATCGAGCCTGAGGAAGCGACGACAAGTAATGGTACCATTACTCAGTATTCCGCCCGGAACAGAGGGAAGTTAGATGAAAACTGA 1047 0.4394 MSFREESVPESTESKSVKQNGFITDTQLTIDESLLVDPKLLFIGSKIGEGAHGKVYEGRYGERIVAIKVLNRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKLLDLHVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSMPEDISPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPMQEPDEIEPEEATTSNGTITQYSARNRGKLDEN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02065 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Adu04g02065 348 Gene3D Phosphorylase Kinase; domain 1 29 120 - -
Adu04g02065 348 MobiDBLite consensus disorder prediction 310 348 - -
Adu04g02065 348 SMART serkin_6 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02065 348 SUPERFAMILY Protein kinase-like (PK-like) 38 323 IPR011009 -
Adu04g02065 348 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Adu04g02065 348 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Adu04g02065 348 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Adu04g02065 348 PRINTS Tyrosine kinase catalytic domain signature 117 130 IPR001245 GO:0004672|GO:0006468
Adu04g02065 348 CDD STKc_MAP3K-like 47 302 - -
Adu04g02065 348 MobiDBLite consensus disorder prediction 326 341 - -
Adu04g02065 348 Pfam Protein tyrosine and serine/threonine kinase 43 302 IPR001245 GO:0004672|GO:0006468
Adu04g02065 348 PIRSF TyrPK_CSF1-R 13 129 - -
Adu04g02065 348 PIRSF TyrPK_CSF1-R 122 344 - -
Adu04g02065 348 Gene3D Transferase(Phosphotransferase) domain 1 123 341 - -
Adu04g02065 348 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 9 327 - -
Adu04g02065 348 ProSitePatterns Protein kinases ATP-binding region signature. 47 68 IPR017441 GO:0005524
Adu04g02065 348 ProSiteProfiles Protein kinase domain profile. 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02065 348 PANTHER SERINE-THREONINE PROTEIN KINASE 9 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02065 Adu-Chr4 100992190 100995104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02065 29 345 MAP Kinase Kinase Kinase AT5G01850 74.780 0.0 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Adu04g02065 PK_Tyr_Ser-Thr 1.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02065 - - jre:109021493 574.318