Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02061 ATGAATAAGGGGAGATTTGGAGAGTGCAATGGTAATTGTGGTGATGGAGTTATGAAGCAGGCTCAGTTTGGATATGTTGAAACTGATCCTTCTGGAAGATATGGTCGTTTGAAGGATGTGCTAGGCAAAGGAGCAATGAAAACAGTGTACAGAGCATTTGATGAGTACCTTGGAATAGAAGTGGCATGGAACCAAGTGCACCTTGGTGATGCATTTCATTCAGCAGAACAACTTCAACGTCTTTACTCAGAGGTTCATCTCCTCAAGCACCTCACCCACAAATCAATGATGATCTTCTATGGTTCTTGGATTGATCTCAATCGCAAAACCTTCAACTTCATCACCGAATTGTTCACTTCCGGTACCCTTAGAGAGTATAGGCAGAAGTATAGAAGAGTAGAAATGAGAGTGCTCAAGAATTGGGCACGCCAGATTCTGAGTGGATTGGAGTATTTGCACAGCAACAACCCACCTGTCATCCATAGAGACCTCAAATGTGACAATATCTTTGTCAATGGCCATTTGGGCCAAGTCAAAATTGGTGACTTAGGCCTTGCAGCTATACTTCTTAGCTCCAAACATGCTCACAGTGTTATAGGCACACCAGAGTTCATGGCACCAGAGTTGTATGAAGAAGAGTACAATGAGCTTGTAGACATATACTCATTTGGGATGTGCATGATTGAGATGCTTACTTTTGAGTTCCCATATAGTGAATGCTTCAACCCTGCTCAAATATACAAGAAAGTTATTTCGGGTAAGCTACCAAATGCATATTACAAGATCAAAGATTTTGAAGCCCAAAGATTTGTGGGGAAATGTTTGGCACATGTGTCAAAGAGGCCATCGGCAAAGGAGCTATTGTTGGACCCATTTTTGGCCATTGATGATCCAATTGCTTCACCGTTAATGCCAATCATAAAACTACCCACAAATCAAGCTTTGAAGCTTAATGCAACTGTAGAAGTTGCAAAGAGCACAGACATGACCATCACTGGGTCAATGAATGAGGTGGACATCAATACTGTTTTTCTTAAAGTGAAGATTTCTGACGCTAATGGGCATACAAGAAACGTGTTCTTTCCCTTTGACACAATAAAGGACACAGCTATGGAGGTAGCCATGGAAATGGTAAAGGAACTTGAAATCAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACCCTTCTTGTTTTCATCAACAACACCAAAGACAGGATAGCTTTAACTATGAAGAAGAAGATGAAGACATAAATAATCATCATCCTTTCTTCTTACCATCATCATCGTCGTCGTCATCATCAACAACTCCATCTTCTGGCTCACTCAACATGTCTTGTTCCTCATACAAGACCCGTTTTAATAATAATGGGAATACTTGTCCCTCTCAATGGCCTCAAGAGGATCCATTATCAATGAATGATGATGCAAGCTCTCTAAGCTCAATGAACTCCATCAAATGTTCCAATGTTCAGTACTGTGACAACTCATCATCAAGAAATGAAGAAAATGAGAACAATAATAATGTACCAACAACAACAAAAGTGTTGAAGGGCCATTTTGATGAAGGGCTATTTGAAGAAGCTAATTACACCAATAAACAACTTTGGAACCCAAGAATAAGGAACACTTGCAATAATAAAAATCATTGCATGTGTAATAATAATGGTCATGGACATGGATGGCCTAGACTAACGAGGATTCAATCTTGCGTGGAAGACAGGAGAACCCAACATCTTCAACGTTTGATTATGTTGGAGGAGATGTGCAATTTCAAGAATAACACTGTTGGAACCATGGAGAACATTGGGTTTTTGAACCTGGAAAGAGGTCGCAGATGCTTTGGTACTCGTTGA 1896 0.4045 MNKGRFGECNGNCGDGVMKQAQFGYVETDPSGRYGRLKDVLGKGAMKTVYRAFDEYLGIEVAWNQVHLGDAFHSAEQLQRLYSEVHLLKHLTHKSMMIFYGSWIDLNRKTFNFITELFTSGTLREYRQKYRRVEMRVLKNWARQILSGLEYLHSNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILLSSKHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFEFPYSECFNPAQIYKKVISGKLPNAYYKIKDFEAQRFVGKCLAHVSKRPSAKELLLDPFLAIDDPIASPLMPIIKLPTNQALKLNATVEVAKSTDMTITGSMNEVDINTVFLKVKISDANGHTRNVFFPFDTIKDTAMEVAMEMVKELEISHLEPLEIAAMIDHEVSALVPTWRDPSCFHQQHQRQDSFNYEEEDEDINNHHPFFLPSSSSSSSSTTPSSGSLNMSCSSYKTRFNNNGNTCPSQWPQEDPLSMNDDASSLSSMNSIKCSNVQYCDNSSSRNEENENNNNVPTTTKVLKGHFDEGLFEEANYTNKQLWNPRIRNTCNNKNHCMCNNNGHGHGWPRLTRIQSCVEDRRTQHLQRLIMLEEMCNFKNNTVGTMENIGFLNLERGRRCFGTR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02061 631 SMART serkin_6 35 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02061 631 CDD STKc_WNK 33 293 - -
Adu04g02061 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 619 - -
Adu04g02061 631 MobiDBLite consensus disorder prediction 471 492 - -
Adu04g02061 631 Pfam Protein kinase domain 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02061 631 MobiDBLite consensus disorder prediction 419 434 - -
Adu04g02061 631 SUPERFAMILY Protein kinase-like (PK-like) 37 476 IPR011009 -
Adu04g02061 631 MobiDBLite consensus disorder prediction 436 455 - -
Adu04g02061 631 Gene3D Transferase(Phosphotransferase) domain 1 118 297 - -
Adu04g02061 631 ProSiteProfiles Protein kinase domain profile. 35 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02061 631 PANTHER WNK KINASE 1 619 - -
Adu04g02061 631 MobiDBLite consensus disorder prediction 417 455 - -
Adu04g02061 631 Gene3D Phosphorylase Kinase; domain 1 18 116 - -
Adu04g02061 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02061 Adu-Chr4 100931763 100937399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02061 23 430 MAP Kinase Kinase Kinase AT3G51630 64.916 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Adu04g02061 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02061 K08867 - gmx:100272206 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02061 04 100931763 100937399 Adu04g02061 04 100931763 100937399 ECH
Adu04g02061 04 100931763 100937399 Adu02g02125 02 84925938 84931384 PCT