Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02055 ATGAAGTGCAGGGATGACGCGACGCAAATGGAGACAACAGACGACACAAGAACTGGAGGACCTGGTGATGAGACGGCTAGCGGACGGAGAGGACCCAATGACCGTGCAGTGTCGGTGACGAGATGGCTGGCGGACGTAAAGGGCCTAGTGACGGTGCGGTTCTCTCCCGGAGAAGTCAAGGTCCGCACCGGTGAACGCCCAGGAGCGCATTTCGAGCATGTGGCTCCATCTGGCGGCACCGCATCACGTCCTTCCGAGCGTGTGGCTCCTTCCGTGGTCTATTCGTCTCCGTGTCATGTTTCATCATCCATTACTGACTACAATCCATCGAAACCACTTGAAGAAGCTCCAGACCATTTTGTCGCCGACGGTCAGCAGTCTAATAAGGTACCGGATCACGATGGCCTTCAGGAAGATGAAATACCTTGTGTTGGAATGCGGTTTGATCAATTGCAAATGGCTCATGAATTCTATGTGACATACGCAAAGAAAGTCGGGTTTGCCACTAAGATACGGACGACAACATGTGATAAGATCACAAATCAACCCATTAACCAAGCTATTCACTGTAATAGGGATGGGTTCCGTGTGTCTTGTGTCAAAGCGTCAACGCGGAAGAACAAGATCTCAGCCGCTAGGAATGTTCAAATAGAGTTTGTCAAGAAGGCTATTTGTAGGGTCTCTGTTGTTGCTAAAGAGGGGCCAGTGGCATGCATGAAGGTTAAAGAGGAAATACTAGTGAATGACACAATTCTTTGTGTTTTGTACGATGTCCACTTCGATCGGTCCACGCAGGAGGTTTGTTGTGAGTGCAATCTATTTGAGAGTTTAGGAGTGCTATGCTGTCATTGTCTTGAAGTCTTCCAAGCTTACAAGGTGTATAAAGTACCTAATCGATATGTTCTCCCTCGTTGGAGCAAGAACATAAAGCGCAAGCATACTTATGTCAAGAGTAGTCACGACGTCAGTCGGTCGGATGAGAGTCATGTTGCATTCAAGGGACTATGTGCACACTTCTACAACATTGCTCAGGATTTTGTAAACGACGACGAAGAAATAGCCTTGCTTCATGCTGCTCTAGAAGAAACAAGAGCTAAGTTGACTGCTCACCGTGCCAAGAAGAGGTCTGAGAGTGTGGCGGACTCCCACAACAATATTGGCTCAACAAGTTCAAACGTTGCCACTGTGATGGACATCCAAGCCCCATCGAAGGTCAACACAAAGGGTCAGCCAAAGAGTAAGAGGCTCAGTGTTGCCCTGGAGAAGTCATTTAAAAAATCTGCTCGGAGGAGAAACAAGCATGACCCCCCAGTGATTTGTCCGGAGCCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGGCCAGGTTGATCCCGAACAAGTTGGTGGCTTCATGTCTTTGTTAAGCTCCTTTAGCAAAAGTTAA 1425 0.48 MKCRDDATQMETTDDTRTGGPGDETASGRRGPNDRAVSVTRWLADVKGLVTVRFSPGEVKVRTGERPGAHFEHVAPSGGTASRPSERVAPSVVYSSPCHVSSSITDYNPSKPLEEAPDHFVADGQQSNKVPDHDGLQEDEIPCVGMRFDQLQMAHEFYVTYAKKVGFATKIRTTTCDKITNQPINQAIHCNRDGFRVSCVKASTRKNKISAARNVQIEFVKKAICRVSVVAKEGPVACMKVKEEILVNDTILCVLYDVHFDRSTQEVCCECNLFESLGVLCCHCLEVFQAYKVYKVPNRYVLPRWSKNIKRKHTYVKSSHDVSRSDESHVAFKGLCAHFYNIAQDFVNDDEEIALLHAALEETRAKLTAHRAKKRSESVADSHNNIGSTSSNVATVMDIQAPSKVNTKGQPKSKRLSVALEKSFKKSARRRNKHDPPVICPEPTQDVRFGGVVGQVDPEQVGGFMSLLSSFSKS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02055 474 Pfam FAR1 DNA-binding domain 156 207 IPR004330 -
Adu04g02055 474 MobiDBLite consensus disorder prediction 1 36 - -
Adu04g02055 474 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 211 IPR031052 GO:0006355
Adu04g02055 474 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 214 368 IPR031052 GO:0006355
Adu04g02055 474 MobiDBLite consensus disorder prediction 62 86 - -
Adu04g02055 474 PANTHER OS03G0843700 PROTEIN 214 368 - -
Adu04g02055 474 ProSiteProfiles Zinc finger SWIM-type profile. 256 292 IPR007527 GO:0008270
Adu04g02055 474 MobiDBLite consensus disorder prediction 424 443 - -
Adu04g02055 474 PANTHER OS03G0843700 PROTEIN 127 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02055 Adu-Chr4 100728098 100733346 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g02055 FAR1 6.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02055 - - aip:107615132 459.914