Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02054 ATGAGCTACTCCAAAAACGACGCCGTCGTGGAAACCGAGCCAACGACACCACCAACACAAAACGACAGCACCGTTTTGTTCGGCAAGTACGAGCTCGGCGAACTTCTGGGCGTAGGAGCGTCCGCTAAAGTGTACCACGCGACGCGCGTGGCCGACGGTGGAAGCGTGGCAGTTAAGGCCGTTAGCAAACGCAACATCGTTTCCAACTGCCATGCAGCCAACGTGGAGCGCGAGATCTCCGTCACGCGCCGCCTCCGCCACCACCCAAACATCATCAACCTCCTTGAGGTCCTCGCCACCAAGACCAAAATCTACCTTGTCATGGAGTTCGCCGCCGGCGGAGAACTTTTCCAAAAGGTCGCCCACGGCGGCCGCTTGACGGAAGACGTCGCCAGAAAATATTTCCGGCAGCTCATTTCCGCCGTAAAGCACTGCCACTCCGCCGGCGTCTACCACCGTGATCTCAAGCTCGACAACCTCCTCCTTGACGATGACGGCAACCTTCAAGTCTCCGATTTCGGGTTGAGCGCCGTGAAGAACCAGATCCGACCTGATGGCTTGCTCCACACAGTTTGTGGGACCCCTGCTTACGTGGCACCTGAGATCTTGGCCAAGAAAGGATATAATGGCGCCACGGTGGACGTGTGGTCCTGCGGCGTCGTTTTGTTTGCATTGACAGCGGGTTTTTTACCCTTCAATGATTACAATATTACAGTTTTGTACAGGAAGATTTACCGCGGTCAGTTTCGGTTTCCAAAGTGGATATCTTGTGGATTAAGAAACCTTATATCGCGTTTGTTGGATGTAAATCCAGAAACGCGAATTACCGTTGACGAGATTATGCAAGACCCGTGGTTTAATTCGGGTGGGTATAAACTTAATCGGGTTCTTGTTGAAGAACCCGAATGGGAGAAGAGTCAAATAAAAATTAAAACGTTAAATGCATTTGACTTGATATCTTTTTCGACTGGGTTGGACATGTCGGGTCTGTTTGTGAATAACGGTGTTCTGAATCATGTGGAGCGATTTGTCCTGAGAGAGAAAGTAGAGAGGATACTAGAGAAGGTGGATGAGTTGGCTAAGGGGACCAATTTAACAGTGACAAGGAATGAGAAATGTGAAGGTGCAAGGTTGGAAGGGCAAGATGGTAATTTAGTTGCCCTTGTGTTGGTTTACCGGTTAACGGATGAGTTGGTGGTGGTTGAAGTCAAGAGTATTGGAAAGATGAATTGCAACCCCAACTTTATGAGTTGCCTCATGGATAACGGGCATAACTCTTTAGAATTTTAG 1290 0.4961 MSYSKNDAVVETEPTTPPTQNDSTVLFGKYELGELLGVGASAKVYHATRVADGGSVAVKAVSKRNIVSNCHAANVEREISVTRRLRHHPNIINLLEVLATKTKIYLVMEFAAGGELFQKVAHGGRLTEDVARKYFRQLISAVKHCHSAGVYHRDLKLDNLLLDDDGNLQVSDFGLSAVKNQIRPDGLLHTVCGTPAYVAPEILAKKGYNGATVDVWSCGVVLFALTAGFLPFNDYNITVLYRKIYRGQFRFPKWISCGLRNLISRLLDVNPETRITVDEIMQDPWFNSGGYKLNRVLVEEPEWEKSQIKIKTLNAFDLISFSTGLDMSGLFVNNGVLNHVERFVLREKVERILEKVDELAKGTNLTVTRNEKCEGARLEGQDGNLVALVLVYRLTDELVVVEVKSIGKMNCNPNFMSCLMDNGHNSLEF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02054 429 MobiDBLite consensus disorder prediction 1 22 - -
Adu04g02054 429 Gene3D Phosphorylase Kinase; domain 1 32 115 - -
Adu04g02054 429 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 15 406 - -
Adu04g02054 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Adu04g02054 429 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Adu04g02054 429 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Adu04g02054 429 PANTHER - 15 406 - -
Adu04g02054 429 Gene3D Transferase(Phosphotransferase) domain 1 116 290 - -
Adu04g02054 429 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Adu04g02054 429 Gene3D Kinase associated domain 1, KA1 308 421 - -
Adu04g02054 429 Pfam NAF domain 311 368 IPR004041 GO:0007165
Adu04g02054 429 SMART serkin_6 30 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02054 429 Pfam Protein kinase domain 30 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g02054 429 CDD CIPK_C 314 404 - -
Adu04g02054 429 ProSiteProfiles Protein kinase domain profile. 30 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02054 Adu-Chr4 100661604 100663258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02054 19 407 CBL-interacting serine-threonine protein kinases AT2G30360 55.443 2.09e-156 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Adu04g02054 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02054 - K12761 gmx:100788245 511.916