Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02043 ATGTGTTTACTATTAAATGAAGCGCCTCTATTAGTTGATGCTGATGCTGAAGATTGCTTTCCTCCTCTGGATTACAGTCAACAGAGGCCTTCACAAGAGCTTGTGGCGAAGGATTTGCATGGCCTTGAATGGAGGTTTAGACATATATACAGAGGGCAGCCACGGAGACATTTGCTCACAACTGGATGGAGTGCATTTGTGAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGTTATTCCTTAGGGGTGACGATGGAGAATTAAGACTAGGGATTCGTAGGGCTGCTCAGTTGAAGAATGGTTTGACAACTCTTTTACTTAGAGATAGTTTCCTTTCCAGTTTCTTGATGGCTTCAGTACAATTTATGTTGTGTATAAAGCAAGAATGGTGA 393 0.4224 MCLLLNEAPLLVDADAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKNGLTTLLLRDSFLSSFLMASVQFMLCIKQEW 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02043 130 PANTHER AUXIN RESPONSE FACTOR 3 16 107 - -
Adu04g02043 130 Pfam B3 DNA binding domain 27 95 IPR003340 GO:0003677
Adu04g02043 130 SMART B3_2 1 96 IPR003340 GO:0003677
Adu04g02043 130 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 107 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu04g02043 130 Gene3D - 7 96 IPR015300 -
Adu04g02043 130 CDD B3_DNA 16 94 IPR003340 GO:0003677
Adu04g02043 130 ProSiteProfiles B3 DNA-binding domain profile. 1 96 IPR003340 GO:0003677
Adu04g02043 130 SUPERFAMILY DNA-binding pseudobarrel domain 16 100 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02043 Adu-Chr4 100253823 100254600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02043 16 99 B3 DNA Binding Superfamily AT2G33860 90.476 5.78e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu04g02043 B3 3e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02043 K14486 - tcc:18596775 179.874