Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02030 ATGGCTTCTAGTAGGGAGAGAAGAAGGGAGGCTCTTCAACAAAAGTTGAATCAACTCCGAGATGTTACAAATTCTAGTGGTGTGAACAAAGCTTCAATTATTGTGGACGCATCCAGATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTGAATTCCGAGCTTGTAATCACTGAAACATCTTCGTCAACCTCTCAAATTGATGATGAACTACCTATGGTGACTGTGGAAACCCTAGAAAAAGGTTTCCACATTAACGTGTATTCAGAGAAGAATTGCCCTGGTATGTTGGTCTCAATACTAAAAGCATTTGAAGAGCTTGGACTTGATGTTCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTCAAGCAGTGGGTGGAGAAAGTCAAAAGAACAATGATACTATTGACGCACAAGTGGTGAAGCAAGCAGTGTTGCAAGCAATCAACAAAAGTAATTACTAA 471 0.4055 MASSRERRREALQQKLNQLRDVTNSSGVNKASIIVDASRYIEELKQKVEGLNSELVITETSSSTSQIDDELPMVTVETLEKGFHINVYSEKNCPGMLVSILKAFEELGLDVLDARVSCEDTFQLQAVGGESQKNNDTIDAQVVKQAVLQAINKSNY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02030 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 55 IPR036638 GO:0046983
Adu04g02030 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 154 - -
Adu04g02030 156 Coils Coil 34 61 - -
Adu04g02030 156 Gene3D - 3 67 IPR036638 GO:0046983
Adu04g02030 156 CDD ACT_UUR-ACR-like 94 151 - -
Adu04g02030 156 Coils Coil 2 22 - -
Adu04g02030 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02030 Adu-Chr4 99809453 99812687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02030 4 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 29.936 1.76e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02030 - - gmx:100527466 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02030 04 99809453 99812687 Adu04g02030 04 99809453 99812687 ECH
Adu04g02030 04 99809453 99812687 Adu10g00989 10 17198806 17201207 ECH
Adu04g02030 04 99809453 99812687 Adu07g00718 07 8384618 8386443 ECH
Adu01g00506 01 6980883 6988855 Adu04g02030 04 99809453 99812687 ECH
Adu04g02030 04 99809453 99812687 Adu01g00506 01 6980883 6988855 ECH