Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02024 ATGAGAATTGAGAGAAAGAAGAAGAGTAGTAATGGATCTGTGTGGTCTATTTTCATGCATGCGGATACCCAAGACTGGCTTCTAATGGGTTTTGGTGTGTTAGGGTCCATTGGTGAAGGTTCCACCACTCCTCTTGTGCTCTATCTCAGTAGCCTCATTATGAACAATATTGGGACTTCTTCTACCATCTCATCAACCACTTTTGTCCATTGCATCAACAAGAATGCAGTGGCTTGGTTATATTTGGCTGCTGGAACATTCCTTGTTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGAGAGACAAGCAGCAAGAATGAGAGCAAAGTACCTGAAAGCAGTGATGAGACAAGAAGTTGCATATTTTGATTTGAATGTGACAAGTACCTCAGACATTATCACTGGCGTTTCCAATGATAGCCTCCTCATTCAGGATGTTATTAGTGAGAAGGTACCAAATTTGTTGATGAACTTTTCATTGTTCATTGGGAGCTACATAGCTGGTTTTGCAATGCTATGGAGATTGGCCATAGTAGGGATCCCATTCACAGTTCTTCTTGTAATCCCTGGCTTCATTTATGGCAAGACATTAATGGGATTAGCAAAGAAAATGAGAGAAGATTATAATAAAGCAGGTGTAATAGCTGAACAAGCAATATGTTCAATAAGAACAGTGTATTCATATGTGGGAGAAAATAAGACCATAAATGCATTCTCTAATGCTCTTCAAGGGTCACTGAGTTTGGGAATCAAACAAGGGTTGGCTAAAGGTTTAGCCATTGGAAGCAATAATGGTATTGTTTTTGGTATATGGTCTTTTTTGTGTTATTATGGTAGCAGATTGGTCATGGACCATGGTGCTAAAGGAGGCACAGTTTTTTCAGCTGGAGCAGCTATCACTGTTGGTGGATTGGCACTAGGTGCTGGTTTAACCAACATGAAATACCTGAGCGAAGCAAGTTCAGCAGCGGAACGCATAAGGGAAGTCAATGGGAGAGTTCCGATGATCGATTCCGACGACAGTGACGGCGAAATCCTGGGAAGCGTTCGAGGGGAAGTAGAATTCCGAAACGTAGATTTCGCGTACCCGTCGAGACCAGAGACCCGGTTTTACGACCCTCTTGGTGGCGAAATAAGGTTTGATGGTGTTGCCATTGATAAGTTGCAGCTCAAGTGGTTCAGATCACAGATGGGGTTAGTGAGTCAAGAGCCCGCATTATTTGCCACCAGCATCAAAGAGAACATCCTGTTTGGGAAGGAAGATGCAACAGAGGCTGAGGTCATTGAGGCTGCAAAAGCTTCCAATGCTCATAATTTTATTTCCATGCTGCCTCAGGGTTATCAAACCCAGGTAGTGGGTGAGAGAGGAACTCAAATGTCAGGTGGACAAAAGCAGAGGATTGCAATTGCTAGGGCCATAATTAAGAAGCCAAGAATGCTTCTTCTGGACGAAGCAACCAGTGCACTAGACTCCCACTCAGAGCGAATTGTCCAAAAAGCCCTCGAACAAGTATCTGTTGGCTGCACCACCATCGTCGTCGCCCACCGCCTGTCCACGATTCGCAATGCCGACGTCATCGTTGCCATGCGAGCCGGAAAGGTGGTGGAGATGGGCACTCACGACGACCTCCTCTTGAATCATGATGGACTCTATTCCTCCATGGTTCGTCTCCAACAAACTGAGAAATCAGAAACAGATGAATCTGTAACTGCCCCAACAACTACTATTCATGTTCCTTCTTCTATGTCGGCTAGTGACACCGCTGATATTCACCACCTATGTTTAATTCATACAGAAGAGAAAGAGGAGAATAAGAACGCTCAGGCGACGGCATCGTTCTGGAGGCTGCTGGCACTGAACCTTCCGGAGTGGAAGCAAGCAGTTATGGGTTGCTTGAATGCGATGGTGTTCGGTGCAGTTCAACCGGTGTACACTTTGATTATGGGGTCGATGATGTTTGTGTATTTCGACAGCGATGATGAAGAGATAAAGAGGAAGACGAAGGAGTACTCGGTTTGCTTTGTGGGACTGTTTGTGTTGTCTTTGATTGTGAACATCGGGCAGCATTATAGCTTTGCATATATGGGAGAGTGCTTGACCAAAAGAATTAGAGAGACTATGTTTAAAAAGATACTCACCTTTGAAGTTTCCTGGTTTGATCTTTCTGAAAATTCTACCGGTGCTATTTGCTCTAGGCTTGCCAACGATGCAAATGTGGTGAGGTCTTTAGTGGGAGATAGGATTGGTTTAGTGGTGCAGACAGCGTCAGCGGTAGTAACAGCTTGGACTTTGGGTTTGGTCATTGCATGGAGACTGGCTATTGTTATGATATGTGTTCAACCCCTTATGATTGCATGCTTCTATACAAAACGTGTCCTTATCAAGACTATGTCAAAAAAGGTTGCAAAGGCGCAAGAAGAAAGTAGCAAGGTTGCCGCTGAAGCCGTTTCAAACCTAAGAACTATCACAGCCTTCTCTTCTCAAAACCGAATCCTCAAAATGCTCGAAAATGCACAAGAAGGACCAAGACGCGAGAATATCCGGCAATCATTTTACGCCGGAATCGGCCTTGCATGTTCCCAAGGCATAACATCATGTGTTTGGGCTCTAAACTATTGGTACGGTGGCAAGCTCGTCGCCGACGGTTACATCACCACAAAGGCATTGTTTCAAAGCTTCATGATTATTGTGAGTACAGCAAGAGTCATTGCCGACGCCGGAAGCATGACCTCGGACCTCGCAAAAGGCGCTGACGCCGTGTGCTCCATTTTCGCCGTCTTAGACCGGACCACGAAGATAGCGGCCGACGACGAAAATGGTCACAACCCGGAACATGTAACAGGACAAATACAACTCCATGATGTGCATTTTGCTTACCCCACTAGGCCAAACGTGACTATCTTCAAATCCTTTTCAATGAAAATAGAAGCTGGAAAGTCAACGGCATTGATAGGTCAAAGTGGATCCGGAAAGTCAACGATTATAGGGCTAATTGCAAGGTTCTATGATCCGCTAAGAGGGTACGTGACAATTGATAATAGAGATGTAAAGTCCTATAATTTGAAACAATTAAGGAGGCACATTGCACTTGTGAGCCAAGAACCTACGTTGTTCAATGGGAGCATAAGAGAGAACATTGCTTATGGATCTAATAACGGTGATGATGATAATGAAGTTGATGAGTCAGAGATCATAGAGGCGTCAAAATTAGCCATGGCACATGATTTTATTACCGGATTGAAGGACGGTTATGACACGTGGTGTGGCGAGAAGGGGTTACAGCTTTCAGGGGGTCAAAAGCAAAGGATAGCGATTGCAAGGGCTATATTGAAAAATCCAAGAGTGTTGTTATTGGATGAGGCAACTAGTGCCCTTGATATTCAATCGGAGAAAGTTGTTCAGGAAGCACTAGAGAGGGCTATGGTGGAGAGGACTAGCGTGATCATCGCACATAGGATGTGTACCATAAAGAAATGTGATCTTATTGCTGTGTTGGAGAAGGGCATGGTTGTGGAAAGTGGGACCCACTCTTCTTTGTTGGCAAAAGGAACTGCTGGAGCTTATTGCAACTTTGTTAGGCTTCAGACTGGAACTAATTAG 3606 0.4454 MRIERKKKSSNGSVWSIFMHADTQDWLLMGFGVLGSIGEGSTTPLVLYLSSLIMNNIGTSSTISSTTFVHCINKNAVAWLYLAAGTFLVCFLEGYCWTRTSERQAARMRAKYLKAVMRQEVAYFDLNVTSTSDIITGVSNDSLLIQDVISEKVPNLLMNFSLFIGSYIAGFAMLWRLAIVGIPFTVLLVIPGFIYGKTLMGLAKKMREDYNKAGVIAEQAICSIRTVYSYVGENKTINAFSNALQGSLSLGIKQGLAKGLAIGSNNGIVFGIWSFLCYYGSRLVMDHGAKGGTVFSAGAAITVGGLALGAGLTNMKYLSEASSAAERIREVNGRVPMIDSDDSDGEILGSVRGEVEFRNVDFAYPSRPETRFYDPLGGEIRFDGVAIDKLQLKWFRSQMGLVSQEPALFATSIKENILFGKEDATEAEVIEAAKASNAHNFISMLPQGYQTQVVGERGTQMSGGQKQRIAIARAIIKKPRMLLLDEATSALDSHSERIVQKALEQVSVGCTTIVVAHRLSTIRNADVIVAMRAGKVVEMGTHDDLLLNHDGLYSSMVRLQQTEKSETDESVTAPTTTIHVPSSMSASDTADIHHLCLIHTEEKEENKNAQATASFWRLLALNLPEWKQAVMGCLNAMVFGAVQPVYTLIMGSMMFVYFDSDDEEIKRKTKEYSVCFVGLFVLSLIVNIGQHYSFAYMGECLTKRIRETMFKKILTFEVSWFDLSENSTGAICSRLANDANVVRSLVGDRIGLVVQTASAVVTAWTLGLVIAWRLAIVMICVQPLMIACFYTKRVLIKTMSKKVAKAQEESSKVAAEAVSNLRTITAFSSQNRILKMLENAQEGPRRENIRQSFYAGIGLACSQGITSCVWALNYWYGGKLVADGYITTKALFQSFMIIVSTARVIADAGSMTSDLAKGADAVCSIFAVLDRTTKIAADDENGHNPEHVTGQIQLHDVHFAYPTRPNVTIFKSFSMKIEAGKSTALIGQSGSGKSTIIGLIARFYDPLRGYVTIDNRDVKSYNLKQLRRHIALVSQEPTLFNGSIRENIAYGSNNGDDDNEVDESEIIEASKLAMAHDFITGLKDGYDTWCGEKGLQLSGGQKQRIAIARAILKNPRVLLLDEATSALDIQSEKVVQEALERAMVERTSVIIAHRMCTIKKCDLIAVLEKGMVVESGTHSSLLAKGTAGAYCNFVRLQTGTN 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02024 1201 Pfam ABC transporter 371 489 IPR003439 GO:0005524
Adu04g02024 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 941 1197 IPR027417 -
Adu04g02024 1201 ProSitePatterns ABC transporters family signature. 461 475 IPR017871 GO:0005524
Adu04g02024 1201 SUPERFAMILY ABC transporter transmembrane region 616 931 IPR036640 GO:0005524|GO:0016021
Adu04g02024 1201 Pfam ABC transporter 971 1125 IPR003439 GO:0005524
Adu04g02024 1201 SMART AAA_5 308 543 IPR003593 -
Adu04g02024 1201 SMART AAA_5 979 1177 IPR003593 -
Adu04g02024 1201 Pfam ABC transporter transmembrane region 632 901 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g02024 1201 Pfam ABC transporter transmembrane region 30 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g02024 1201 SUPERFAMILY ABC transporter transmembrane region 23 339 IPR036640 GO:0005524|GO:0016021
Adu04g02024 1201 ProSitePatterns ABC transporters family signature. 1097 1111 IPR017871 GO:0005524
Adu04g02024 1201 Gene3D - 950 1198 IPR027417 -
Adu04g02024 1201 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 18 370 - -
Adu04g02024 1201 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 371 1199 - -
Adu04g02024 1201 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 18 370 IPR039421 -
Adu04g02024 1201 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 371 1199 IPR039421 -
Adu04g02024 1201 CDD ABC_6TM_Pgp_ABCB1_D2_like 619 935 - -
Adu04g02024 1201 Gene3D ABC transporter type 1, transmembrane domain 562 918 IPR036640 GO:0005524|GO:0016021
Adu04g02024 1201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 315 558 IPR003439 GO:0005524
Adu04g02024 1201 Gene3D - 372 561 IPR027417 -
Adu04g02024 1201 Gene3D ABC transporter type 1, transmembrane domain 919 949 IPR036640 GO:0005524|GO:0016021
Adu04g02024 1201 Gene3D ABC transporter type 1, transmembrane domain 33 371 IPR036640 GO:0005524|GO:0016021
Adu04g02024 1201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 31 320 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g02024 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 560 IPR027417 -
Adu04g02024 1201 CDD ABC_MTABC3_MDL1_MDL2 952 1197 - -
Adu04g02024 1201 CDD ABC_6TM_Pgp_ABCB1_D1_like 29 328 - -
Adu04g02024 1201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 952 1194 IPR003439 GO:0005524
Adu04g02024 1201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 636 917 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02024 Adu-Chr4 99365225 99376285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02024 4 1201 Calmodulin-binding Proteins AT2G36910 39.237 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02024 K05658 - gmx:100807709 1613.59