Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02018 ATGGGTCAAGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAACACATGAGGAAGTTGATGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAGTGTTCGATTATCACGGCTTCAATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGAACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGAAAGAGTCGTGTGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTCAAGGATTTAGACCGCCAAATAATTACAGCACTGGAAACCTTAAGAGAAAACCTACACCTGAGACAAGGTGTGGCTGTAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCAGAATGCAAACCTATTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATATTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAAGCAAACTGGCTCTTATGTGATTTACTCTATCGGTTTGGACCAAACGCCAAATGAGATGTGGCGTGTATTCTATTGTGACATTGAGATGGAATTCAATTGTTCATGTATGAGAATGGAATCACTTGGCATACCTTGTGAACACATAGTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTGGGTTTGCAAAATGCGGTCGGGCTTCATTGGGATTCTTTGATGCTAAGTCAGTATGGTTGTTTGATGGATTGGAGGAAGATGCTGCACAAAACGGGGGGGGTCAATGATGCAGATAGTGTAAGAGATGGTGTGCAAGTGGATGCTTCTGGAGCTGGTCTCGCAACCAATGATCTCGGACATAGCATGCCAAGGGACCCAAGAAAATGTAGAAAAAAAGGGGGGGCTTCACAGTCCAATAAAAGAAAACATCGATGTGGACAGTGTGGCATGGAGGGCCACAATCGAACAACTTGTCGTGTTCGTCGTGGCATCTCACAGTCAGAAGGCCTTGGAAATGACACATTTGATAATGACTCGGATGACCACATGAACATTGAAGATGACTCATTGGTATATGATGAGAGTGCTTCCTACAATAGCAATGAGAATAGGAGTACAGGGGAGCTCAGCTTTTTAACTTCTTTGATAAATTCTGCAGGTTCAATGGTTAGAGTATTCACAAGCCTCCAAGAAAATGCACCAAAAAGCGTTGTAATGGGTTCCGCAATTGGTGTTGATACAAATTTCACCATCCTAAGCCAGATATTGTTCTACCAAAAGCCAAGGGTCACTGAGAAAGAGAAGAAAACGAAATAG 1575 0.426 MGQEFSHEGVNSEHTSYDQYEQEEETHEEVDVDYMDEDDTNVEPVFDYHGFNEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRVGALKLKNFVCHRQGFRPPNNYSTGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRWKEVQADLASVNGRPRMQTYFQQLERSAANVYTLSIFHIFQPILVRAASMKVINMKQTGSYVIYSIGLDQTPNEMWRVFYCDIEMEFNCSCMRMESLGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYGCLMDWRKMLHKTGGVNDADSVRDGVQVDASGAGLATNDLGHSMPRDPRKCRKKGGASQSNKRKHRCGQCGMEGHNRTTCRVRRGISQSEGLGNDTFDNDSDDHMNIEDDSLVYDESASYNSNENRSTGELSFLTSLINSAGSMVRVFTSLQENAPKSVVMGSAIGVDTNFTILSQILFYQKPRVTEKEKKTK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02018 524 ProSiteProfiles Zinc finger SWIM-type profile. 261 294 IPR007527 GO:0008270
Adu04g02018 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 205 312 - -
Adu04g02018 524 MobiDBLite consensus disorder prediction 1 30 - -
Adu04g02018 524 MobiDBLite consensus disorder prediction 364 401 - -
Adu04g02018 524 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Adu04g02018 524 MobiDBLite consensus disorder prediction 1 16 - -
Adu04g02018 524 SMART 26again6 269 296 IPR006564 GO:0008270
Adu04g02018 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 205 312 IPR031052 GO:0006355
Adu04g02018 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 89 185 - -
Adu04g02018 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 185 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02018 Adu-Chr4 99036786 99040453 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02018 455 511 Miscellaneous Gene Families AT4G07390 66.667 1.13e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu04g02018 FAR1 7.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02018 - - aip:107630469 523.472