Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01987 ATGAAAGTGGAGAGGAAGAGGGAGGAGGAGGAGTGGCAGAAATATGATGAAAAAAACTTTCGTCCTTCTTTGTATGAGTGGTTAGGCATAGCTGAAGAAGATGCCTCGCTGGTCAAAAGACGAGTAAAGCATCTTCTTCCTTCTTTGCCTCCAAACGCAGTTATTCTAGAATCGTCTGGAATAGTTGCACATTCACAAAATCAAGCCATTTCCATAATCCCAACCAATAATCCTGATGTGGTCGTTGCTAACAACAGCAACACCAATAACACAGTTGGGCTTAAACGTTCAGCGACATCTATTGTCAGTGGAAATGTAAATCTTCAAGGCGATGAACTAGATGACGAAAAAAATAATATTACAACTAGGAGCTACTATCGTTGCACTACAATTGGTTGCAACGCGAAAAAGAAAGTGGAGAGGTGCCTAAATGACCCCACCCATGCACTAACTACCTATGAAGGTTTTCACACTCATGATTTGCCACCAATCCTCCCTCCTCCGTCAAGATCTTTCGGTCTCTACAACAACTCCACCCTTAGTTCCATACTTGGTAGAGGCAGAGGTATACAAAAAGGTGTAGCTTCAGATGCAGGTGCAGGTGCAAGGGCAAGATATCATGCTAATAACACTATTACTAGTGTTAATGGTAGAATTGACAGTGGTAGTAGTGTTAATGACATTGGCTCGCTTGAGAATATTGGTACTGGACTGCTTGAGGATATTATTAATTTGTCTTCAGTAGCACCTCAATATTATCATCATCGTCATCAACCAACATCTCTATAA 789 0.4132 MKVERKREEEEWQKYDEKNFRPSLYEWLGIAEEDASLVKRRVKHLLPSLPPNAVILESSGIVAHSQNQAISIIPTNNPDVVVANNSNTNNTVGLKRSATSIVSGNVNLQGDELDDEKNNITTRSYYRCTTIGCNAKKKVERCLNDPTHALTTYEGFHTHDLPPILPPPSRSFGLYNNSTLSSILGRGRGIQKGVASDAGAGARARYHANNTITSVNGRIDSGSSVNDIGSLENIGTGLLEDIINLSSVAPQYYHHRHQPTSL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01987 262 SMART WRKY_cls 113 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g01987 262 Pfam WRKY DNA -binding domain 117 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g01987 262 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 123 167 IPR044810 GO:0003700
Adu04g01987 262 Gene3D WRKY domain 112 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g01987 262 SUPERFAMILY WRKY DNA-binding domain 117 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g01987 262 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 123 167 - -
Adu04g01987 262 ProSiteProfiles WRKY domain profile. 117 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01987 Adu-Chr4 97663963 97668457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01987 117 187 WRKY Transcription Factor Family AT2G47260 49.296 8.50e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g01987 WRKY 4.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01987 - - aip:107636875 410.994