Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01947 ATGAGAGGCAAAAGTGGACCACAGAATTATGATTGCAAATTCAGGGGTGTGAGACAGAGGATTTGGGGCAAATGGGTTGCAGAAATCTGCGAACCTATCAATAGCAAGCGTGTTGGTGAAAAAGCAAACAGGCTTTGGTTTGGAACCTTTTCTATTGTCCTTGAAGCTGCTCTTGCTTATGATGAAGCAGCAAAGAACTTGTATGGCCCTGGCGCTCGTTTGAACTTTCCTCACCATTATGGCATAGAATCAGTAGGTTCTAATGGATCATCTACGAGTACAGGATTTGATCAGAAATCACCAAGTGGAACCTATGTAAATATTTTGAATGGTGGTGATGTTGCAAAAGTTGATTGGTTGAAGGAGAATCTTGATATGGGTCTCGAAGAAAAGTTTTCTCAGGCAAACGAATTATTGGAGATGGAATGTAAGAGAGGAATTCTTCAAGAGCCTTTTAAGTATGTCAAGGACGATGTTGCTGGAGGAAGTGGAGGATTAGAGGGAGAGTTAGAGGACGTTTTGAGGAACTCTAGTATAGTTGAAGAGTGGGATGATGGGAAGAGTGAAGTGGAAAATTGCAAATCTGGTAATGAGTTGAGCTGCAGGAACCACTACTTCGAATACTTGCATAATATGATTCCAAACAGTAATCCAAAGTATAAGCAGTTCAACAATCTCAAATCTCTATTCCAACAAAAGACATGGAGGAAGTACTTGCAGAAATTCTGCAGTTTTGCAGAAAGTGTTCCGAGATGA 756 0.4074 MRGKSGPQNYDCKFRGVRQRIWGKWVAEICEPINSKRVGEKANRLWFGTFSIVLEAALAYDEAAKNLYGPGARLNFPHHYGIESVGSNGSSTSTGFDQKSPSGTYVNILNGGDVAKVDWLKENLDMGLEEKFSQANELLEMECKRGILQEPFKYVKDDVAGGSGGLEGELEDVLRNSSIVEEWDDGKSEVENCKSGNELSCRNHYFEYLHNMIPNSNPKYKQFNNLKSLFQQKTWRKYLQKFCSFAESVPR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01947 251 CDD AP2 12 79 IPR001471 GO:0003700|GO:0006355
Adu04g01947 251 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 219 - -
Adu04g01947 251 SMART rav1_2 13 83 IPR001471 GO:0003700|GO:0006355
Adu04g01947 251 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 219 - -
Adu04g01947 251 SUPERFAMILY DNA-binding domain 13 78 IPR016177 GO:0003677
Adu04g01947 251 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Adu04g01947 251 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Adu04g01947 251 Gene3D AP2/ERF domain 12 79 IPR036955 GO:0003700|GO:0006355
Adu04g01947 251 Pfam AP2 domain 12 69 IPR001471 GO:0003700|GO:0006355
Adu04g01947 251 ProSiteProfiles AP2/ERF domain profile. 13 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01947 Adu-Chr4 96454239 96455077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01947 1 102 AP2-EREBP Transcription Factor Family AT1G75490 51.961 1.31e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu04g01947 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01947 - - aip:107637982 342.428