Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01941 ATGCTTCATCGGCAGCGCTATCAGCCTTGCACCGTCGTCTCACAAACCTCCATTGCACTCAACTTCTATCGGCCTTGCTCGCATCGCTCCCTTCCGTCGCACCCCTTCCTGGTTCTTCTTCGTCGCACCCCTTCTGTCAGCCTTGCTTGCATTGCTCCCTTTCGAACCCTAATGTGTGTTTGTCTCTTCGATCTCGCCACTAGTGAAATTGACACAGCACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGTTCCGTGGCATTGATGCATATATCAATTTCAACGTCAGCAATTATGATGAAGATATAAAGCAGAGCACTGATTTGTGTATATTCTGCGTAGGCAGAGCACATGTTCTGAGTAGAAGTATGGTGCAAATATACAATCTGCAACACACTTCCTCCTTAGAAACTTGCATGCCCCACACGGTGAACCTGACCCACCACTACTTGTTTCATTTCCACTTGAAGAAGCCATAG 486 0.4794 MLHRQRYQPCTVVSQTSIALNFYRPCSHRSLPSHPFLVLLRRTPSVSLACIAPFRTLMCVCLFDLATSEIDTAHAAARAYDRAAIKFRGIDAYINFNVSNYDEDIKQSTDLCIFCVGRAHVLSRSMVQIYNLQHTSSLETCMPHTVNLTHHYLFHFHLKKP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01941 161 SUPERFAMILY DNA-binding domain 71 99 IPR016177 GO:0003677
Adu04g01941 161 Gene3D AP2/ERF domain 66 99 IPR036955 GO:0003700|GO:0006355
Adu04g01941 161 ProSiteProfiles AP2/ERF domain profile. 22 97 IPR001471 GO:0003700|GO:0006355
Adu04g01941 161 SMART rav1_2 67 103 IPR001471 GO:0003700|GO:0006355
Adu04g01941 161 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 68 111 - -
Adu04g01941 161 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 68 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01941 Adu-Chr4 96172259 96173240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01941 71 112 AP2-EREBP Transcription Factor Family AT2G39250 59.524 1.73e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01941 K09284 - aip:107643827 158.688