Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01927 ATGGCCACAGACACTTCTCCGAACTTTCAGGCGGTCATTCCCACTACTGAGTTCCACACAGAACTTTCACTACCAACACCAGATCACGATGGCTTAGACTTCTGGCAGTACATGGTTGCAGGTTCAATAGCAGGATCAGTGGAGCACATGGCTATGTTCCCAGTTGACACTCTCAAGACCCGCATGCAAGCTCTTACAACAACCACCACCACCACTTCATGCCTCCGCCAATCCCTCTCTTCCATCCTCAAACTCGAAGGTCCTTCCTCCCTCTACCGCGGCATCTCCGCCATGGCCCTCGGTGCAGGCCCCGCCCACGCCGTTTACTTCTCCGTCTACGAGTTTTGCAAACAAGCCTTCTCCTCCTCTTTCACCACCAACAATTACTCCTCACTGGTGCATGCCGCTTCTGGTGTCTGCGCTACAGTCACCAGCGACGCCGTTTTCACTCCCATGGACGTCGTGAAGCAGAGGCTTCAGCTGAAGAGCAGTCCGTACAAGGGTGTGGTGGATTGCGTGAGGAGAGTGGCCCTCGAAGAAGGGGTTGGCGCGTTTTTTAAGTCGTATCGGACTACGGTTGTGATGAACGCTCCGTTTACGGCGGTGCATTTTGCGGCGTATGAGGCGACAAAGAAGGGGTTGGTGGAGGTGTCGCCGGAGATCGCGGATGACAGGAGGTGGGTGGTTCATGCTACCGCTGGTGGTGCTGCCGGAGCCCTGGCTGCTGTTGTCACAACCCCGCTTGATGTTGTCAAAACTCAACTTCAGTGCCAGGGTGTTTGTGGATGTGACAGATTCTCTAGTAATTCAATTGGGCATGTAATTAAAACAGTGATAAGAAAAGATGGATATAGAGGTCTCATGAGAGGTTATGTCCCTAGGATGCTGTTTCATGCCCCTGCAGCTGCAATTTGTTGGTCCACTTACGAGGCATCCAAATCTTTCTTTCACAAACTTAATTAA 963 0.5223 MATDTSPNFQAVIPTTEFHTELSLPTPDHDGLDFWQYMVAGSIAGSVEHMAMFPVDTLKTRMQALTTTTTTTSCLRQSLSSILKLEGPSSLYRGISAMALGAGPAHAVYFSVYEFCKQAFSSSFTTNNYSSLVHAASGVCATVTSDAVFTPMDVVKQRLQLKSSPYKGVVDCVRRVALEEGVGAFFKSYRTTVVMNAPFTAVHFAAYEATKKGLVEVSPEIADDRRWVVHATAGGAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFSSNSIGHVIKTVIRKDGYRGLMRGYVPRMLFHAPAAAICWSTYEASKSFFHKLN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01927 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Adu04g01927 320 Pfam Mitochondrial carrier protein 32 122 IPR018108 -
Adu04g01927 320 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Adu04g01927 320 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Adu04g01927 320 PANTHER MITOFERRIN-LIKE 1 320 - -
Adu04g01927 320 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Adu04g01927 320 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Adu04g01927 320 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Adu04g01927 320 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Adu04g01927 320 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Adu04g01927 320 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Adu04g01927 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Adu04g01927 320 Gene3D Mitochondrial carrier domain 9 218 IPR023395 -
Adu04g01927 320 Gene3D Mitochondrial carrier domain 219 320 IPR023395 -
Adu04g01927 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 119 IPR018108 -
Adu04g01927 320 SUPERFAMILY Mitochondrial carrier 30 310 IPR023395 -
Adu04g01927 320 PANTHER MITOFERRIN-1-RELATED 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01927 Adu-Chr4 95989908 95994824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01927 6 320 Chloroplast and Mitochondria Gene Families AT1G07030 66.139 1.36e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01927 K15113 - tcc:18597466 467.618