Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01906 ATGAGTGCCAACATAATGGTGGCAGCATCAAATTCCTCGTCCTTGAACGAGGAACAAAAGGCCCTGCTCTGTAGCAGCTGGACGGAAGCTGGTAGTGTCACCGACATTTCAACAAGGCATTATTTTTTTATCCCTCCATCTGAATTGAGGAACTTTAATTTTACTGCATTCCCCAATTTAATTCGTCTCGAACTTAGTGGTTTGGGACTCAAGGGTATCATTCCAACTGAAATAAGCTCTCTTACAAAGCTTATGTATCTTGATCTCTCCTCTAACTATCTTGAAGGTGAGTTGCCTGCTTCACTTTCAAGTCTCACTCAACTTAGGATTTTTAATGTTTCAAGCAATTTTCTTATTGGTATGATCCCTTCCTCTTTTAATCACTTTAAGTATTTGTTTCATCTCTCCCTTGACTCAAACAACTTTAAAGGCCCCATTCCTGTAGAATTGAAGAATTTAAAAGGTTTGAAGCAGTTAACTCTTTCAAATAATTCATTCAATGGTTCAATACCACCCACTCTGGGACAACTGGAGAACTTGGAATGTCTCTCCTTTGGTTTAAACCATATAGAAGGTCCCATCCCTATTGAACTAGGGCACTTGATCCATCTGGAAGTTTTAGACCTTTCTAACAACAATATTTCTGGTGTCATACCATATGGGATTGGCCAACTCTCTAGGCTTTCAACTTTAGATATTTCCAACAATAACTTTGAGGGACCAATTCCATTTGTTATTCTAAACCATTGCAGAGTTGTGCAACTAAGTAACAACTCCTTATGTGGTGGCATTCCTTCTCAAATTGGCAATCTTTTTTCTCTAGACCTCAGTTATAATAACCTCTCTGGAAACATACCTAAGGGACTCCATTCTGTACCTTACCTCAATATGTCTTACAATTACTTTGTTGTGGATCACAACTATTGTGGCTTTCCAAAAGACTCATTGATCGGTAATAAGATACCAGGTCCCCCTTGCCCTTCTACTCATGATTATAATTATATTCCTTTACCTGTACTAATCTTAGGGTCAATCTTTAATGGCACATGGATTTCACTCATTTTTGTATGTTGGGGAATTCATGTTTTTTGTCCATACGAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTGAAGCCACACAGGACTTTGATATCAGATATTGCATTGGAACCGGGGCTTATGGTAGCGTCTACGAAGCGAGACTTCCAAGTGACAAAACTGTTGCATTAAAGAAGCTTCACAAAACAGAATCAAAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTACTATTTGCATAACAGATGCATGTTTTTGGTGTACGAATACTTGGAAAGAGGAAGCTTATTCTGTAACTTGGCCAACGAGATGGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCATTGTCCTTCTCCTATTGTTCATAGAGATGTCAGCAGCAACAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTTAGCACAGCGAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATATATTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAACGATGGGTCATCACCCAAGAGAATTCATGTCCACTATGACAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCACGGATTCCACTTCCGAAATCTCGGAAAGAAATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGTTTTCAGCTTCCAAGACTTCAATGAATTCTTCTTTTTTTTGA 2040 0.3931 MSANIMVAASNSSSLNEEQKALLCSSWTEAGSVTDISTRHYFFIPPSELRNFNFTAFPNLIRLELSGLGLKGIIPTEISSLTKLMYLDLSSNYLEGELPASLSSLTQLRIFNVSSNFLIGMIPSSFNHFKYLFHLSLDSNNFKGPIPVELKNLKGLKQLTLSNNSFNGSIPPTLGQLENLECLSFGLNHIEGPIPIELGHLIHLEVLDLSNNNISGVIPYGIGQLSRLSTLDISNNNFEGPIPFVILNHCRVVQLSNNSLCGGIPSQIGNLFSLDLSYNNLSGNIPKGLHSVPYLNMSYNYFVVDHNYCGFPKDSLIGNKIPGPPCPSTHDYNYIPLPVLILGSIFNGTWISLIFVCWGIHVFCPYELENKATKNGDLFSIWNYDGKIAFEDIIEATQDFDIRYCIGTGAYGSVYEARLPSDKTVALKKLHKTESKNPSYYKSFCNEVEVLTEIRHRNIIRLYGYYLHNRCMFLVYEYLERGSLFCNLANEMEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFSTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETTMGHHPREFMSTMTKPSTQQLLVKDVLDPRIPLPKSRKEMQDVVHVVKLALACLSSDPKSRPSMQDVANEFSASKTSMNSSFF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01906 679 Gene3D Phosphorylase Kinase; domain 1 366 478 - -
Adu04g01906 679 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 184 673 - -
Adu04g01906 679 ProSiteProfiles Protein kinase domain profile. 400 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01906 679 Gene3D Ribonuclease Inhibitor 24 331 IPR032675 -
Adu04g01906 679 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 46 246 - -
Adu04g01906 679 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 184 673 - -
Adu04g01906 679 Gene3D Transferase(Phosphotransferase) domain 1 479 678 - -
Adu04g01906 679 SUPERFAMILY L domain-like 47 302 - -
Adu04g01906 679 SMART LRR_typ_2 201 225 IPR003591 -
Adu04g01906 679 SMART LRR_typ_2 153 177 IPR003591 -
Adu04g01906 679 SMART LRR_typ_2 81 105 IPR003591 -
Adu04g01906 679 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Adu04g01906 679 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 46 246 - -
Adu04g01906 679 Pfam Protein kinase domain 405 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01906 679 Pfam Leucine Rich repeats (2 copies) 203 238 IPR025875 -
Adu04g01906 679 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Adu04g01906 679 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Adu04g01906 679 Pfam Leucine Rich Repeat 83 105 IPR001611 GO:0005515
Adu04g01906 679 PRINTS Leucine-rich repeat signature 225 238 - -
Adu04g01906 679 PRINTS Leucine-rich repeat signature 204 217 - -
Adu04g01906 679 SUPERFAMILY Protein kinase-like (PK-like) 381 665 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01906 Adu-Chr4 95242236 95306766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01906 60 572 Receptor kinase-like Gene Family AT4G08850 38.679 4.10e-104 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g01906 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01906 - - adu:107475713 921.383