Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu04g01904 | ATGGCCATATCATTCACTTGCGTTGTTTTCATATTAGTGCCACTTGTATTTGTTGGCAGCATCACCACCAATGCTGAAACTCACAAATCCAAATTGTCACCCTTAGATAAAGAAGCCAATGCTCTGTTTTCAATCAGTGAATTGTGGGGTATCCAATATAATAATGTCTCATACCGTTGCCACCGGCCCGGAATTAAGTGCAACAAAGCTGGAAGCATAACAACGCTTTCACCTCCAACTCCAAGGAATTACAGCTCTGACTTCTTCCCACAACTATGCAATATGCAACTAAAATTTTTAGTTTTTCCAAATCCAGTCCGTCTAGATTTCAGTGAAATGGGGTTATGTGAATTCCCTAAACTAAGGGGTCTCGAGAAGCTACAACATCTCAACCTATCATACAACCATTTTTCAGGTGAGGCTCCTTTAACATTATTGACAAATCTAACTCAACTTGTGGTGTTGGACATTTCCAATAACCAATACATTAGTGGTCCAATTCCACAAGAACTAAGCAAACTGGAGAGACTTGTCACGTTGGACTTGAGTGCCAACGTGCTCAGCGAAGGCATTCCATTGATCTTGGGTCAAATGAGCAGTCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTCCCTATCTGGTCCAATTCCTGATTATGTGGACCTCAGCTATAACAATTTAAGTGGAAGCATTCCTTCTCAAATTGGAAACCTTTCATATTTAGACCTTCGTTACAATAACCTTAGTATCAAAAACACAAAGGGATTTGAGTCTATTACAGTGTGCTATCTGCATTGCAATCCCTTTCTTCCTGATGGAAATTATGACTGCGATGATCCACAAGATCAATTAGAAGACCATCACAATAAGCATTCTAGTCGATCATTGGTTTTGGTCATAATCGTGGTCTGCATTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCATGCCAGGCATCATGACAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGACAAAATTGCATTTGAGGACATCATTCAAGCCACACAGGGCTTCGATATCGGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAATGGTAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTTTTACAAAAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTTGCATAA | 1425 | 0.3972 | MAISFTCVVFILVPLVFVGSITTNAETHKSKLSPLDKEANALFSISELWGIQYNNVSYRCHRPGIKCNKAGSITTLSPPTPRNYSSDFFPQLCNMQLKFLVFPNPVRLDFSEMGLCEFPKLRGLEKLQHLNLSYNHFSGEAPLTLLTNLTQLVVLDISNNQYISGPIPQELSKLERLVTLDLSANVLSEGIPLILGQMSSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNSLSGPIPDYVDLSYNNLSGSIPSQIGNLSYLDLRYNNLSIKNTKGFESITVCYLHCNPFLPDGNYDCDDPQDQLEDHHNKHSSRSLVLVIIVVCITISLGSVGIGICIFHARHHDKLENKATKNGDLFSIWNYDDKIAFEDIIQATQGFDIGYCIGTGAYGSVYEARLPNGKTVALKKLHKTESENPSFYKSFCNEVEVLTEIRHRNIIRLYGYCFA | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu04g01904 | 474 | SUPERFAMILY | L domain-like | 99 | 319 | - | - | |
Adu04g01904 | 474 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 119 | 267 | - | - | |
Adu04g01904 | 474 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 28 | 226 | - | - | |
Adu04g01904 | 474 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 127 | 472 | - | - | |
Adu04g01904 | 474 | ProSitePatterns | Protein kinases ATP-binding region signature. | 412 | 434 | IPR017441 | GO:0005524 | |
Adu04g01904 | 474 | ProSiteProfiles | Leucine-rich repeat profile. | 126 | 147 | IPR001611 | GO:0005515 | |
Adu04g01904 | 474 | ProSiteProfiles | Leucine-rich repeat profile. | 248 | 270 | IPR001611 | GO:0005515 | |
Adu04g01904 | 474 | Pfam | Leucine rich repeat | 200 | 259 | IPR001611 | GO:0005515 | |
Adu04g01904 | 474 | Pfam | Leucine Rich Repeat | 126 | 140 | IPR001611 | GO:0005515 | |
Adu04g01904 | 474 | Gene3D | Phosphorylase Kinase; domain 1 | 367 | 474 | - | - | |
Adu04g01904 | 474 | PRINTS | Leucine-rich repeat signature | 225 | 238 | - | - | |
Adu04g01904 | 474 | PRINTS | Leucine-rich repeat signature | 246 | 259 | - | - | |
Adu04g01904 | 474 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 28 | 226 | - | - | |
Adu04g01904 | 474 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 127 | 472 | - | - | |
Adu04g01904 | 474 | SUPERFAMILY | Protein kinase-like (PK-like) | 386 | 473 | IPR011009 | - | |
Adu04g01904 | 474 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 119 | 267 | - | - | |
Adu04g01904 | 474 | Gene3D | Ribonuclease Inhibitor | 31 | 312 | IPR032675 | - | |
Adu04g01904 | 474 | Pfam | Protein kinase domain | 411 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu04g01904 | 474 | ProSiteProfiles | Protein kinase domain profile. | 406 | 474 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu04g01904 | Adu-Chr4 | 95224131 | 95225790 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu04g01904 | 125 | 472 | Receptor kinase-like Gene Family | AT4G08850 | 35.561 | 4.31e-54 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Adu04g01904 | Pkinase | 2.1e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu04g01904 | - | - | ahf:112728727 | 571.237 |