Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01904 ATGGCCATATCATTCACTTGCGTTGTTTTCATATTAGTGCCACTTGTATTTGTTGGCAGCATCACCACCAATGCTGAAACTCACAAATCCAAATTGTCACCCTTAGATAAAGAAGCCAATGCTCTGTTTTCAATCAGTGAATTGTGGGGTATCCAATATAATAATGTCTCATACCGTTGCCACCGGCCCGGAATTAAGTGCAACAAAGCTGGAAGCATAACAACGCTTTCACCTCCAACTCCAAGGAATTACAGCTCTGACTTCTTCCCACAACTATGCAATATGCAACTAAAATTTTTAGTTTTTCCAAATCCAGTCCGTCTAGATTTCAGTGAAATGGGGTTATGTGAATTCCCTAAACTAAGGGGTCTCGAGAAGCTACAACATCTCAACCTATCATACAACCATTTTTCAGGTGAGGCTCCTTTAACATTATTGACAAATCTAACTCAACTTGTGGTGTTGGACATTTCCAATAACCAATACATTAGTGGTCCAATTCCACAAGAACTAAGCAAACTGGAGAGACTTGTCACGTTGGACTTGAGTGCCAACGTGCTCAGCGAAGGCATTCCATTGATCTTGGGTCAAATGAGCAGTCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTCCCTATCTGGTCCAATTCCTGATTATGTGGACCTCAGCTATAACAATTTAAGTGGAAGCATTCCTTCTCAAATTGGAAACCTTTCATATTTAGACCTTCGTTACAATAACCTTAGTATCAAAAACACAAAGGGATTTGAGTCTATTACAGTGTGCTATCTGCATTGCAATCCCTTTCTTCCTGATGGAAATTATGACTGCGATGATCCACAAGATCAATTAGAAGACCATCACAATAAGCATTCTAGTCGATCATTGGTTTTGGTCATAATCGTGGTCTGCATTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCATGCCAGGCATCATGACAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGACAAAATTGCATTTGAGGACATCATTCAAGCCACACAGGGCTTCGATATCGGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAATGGTAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTTTTACAAAAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTTGCATAA 1425 0.3972 MAISFTCVVFILVPLVFVGSITTNAETHKSKLSPLDKEANALFSISELWGIQYNNVSYRCHRPGIKCNKAGSITTLSPPTPRNYSSDFFPQLCNMQLKFLVFPNPVRLDFSEMGLCEFPKLRGLEKLQHLNLSYNHFSGEAPLTLLTNLTQLVVLDISNNQYISGPIPQELSKLERLVTLDLSANVLSEGIPLILGQMSSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNSLSGPIPDYVDLSYNNLSGSIPSQIGNLSYLDLRYNNLSIKNTKGFESITVCYLHCNPFLPDGNYDCDDPQDQLEDHHNKHSSRSLVLVIIVVCITISLGSVGIGICIFHARHHDKLENKATKNGDLFSIWNYDDKIAFEDIIQATQGFDIGYCIGTGAYGSVYEARLPNGKTVALKKLHKTESENPSFYKSFCNEVEVLTEIRHRNIIRLYGYCFA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01904 474 SUPERFAMILY L domain-like 99 319 - -
Adu04g01904 474 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 119 267 - -
Adu04g01904 474 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 28 226 - -
Adu04g01904 474 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 127 472 - -
Adu04g01904 474 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Adu04g01904 474 ProSiteProfiles Leucine-rich repeat profile. 126 147 IPR001611 GO:0005515
Adu04g01904 474 ProSiteProfiles Leucine-rich repeat profile. 248 270 IPR001611 GO:0005515
Adu04g01904 474 Pfam Leucine rich repeat 200 259 IPR001611 GO:0005515
Adu04g01904 474 Pfam Leucine Rich Repeat 126 140 IPR001611 GO:0005515
Adu04g01904 474 Gene3D Phosphorylase Kinase; domain 1 367 474 - -
Adu04g01904 474 PRINTS Leucine-rich repeat signature 225 238 - -
Adu04g01904 474 PRINTS Leucine-rich repeat signature 246 259 - -
Adu04g01904 474 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 28 226 - -
Adu04g01904 474 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 127 472 - -
Adu04g01904 474 SUPERFAMILY Protein kinase-like (PK-like) 386 473 IPR011009 -
Adu04g01904 474 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 119 267 - -
Adu04g01904 474 Gene3D Ribonuclease Inhibitor 31 312 IPR032675 -
Adu04g01904 474 Pfam Protein kinase domain 411 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g01904 474 ProSiteProfiles Protein kinase domain profile. 406 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01904 Adu-Chr4 95224131 95225790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01904 125 472 Receptor kinase-like Gene Family AT4G08850 35.561 4.31e-54 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g01904 Pkinase 2.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01904 - - ahf:112728727 571.237