Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01900 ATGATGATGATGATGAAGATGGTGGAAGAAGAAAGCCATGGATCAGAATGTTCTAAGACAAGAAGCCCTTGCAATGATGATAATAATAATAATGAAGATGATGGCTATTGTGAAGAAGAGAGTGAAACCAATAATGAAGAAGAAGTTGAAGAAGAAGATGAGAGTAGTTATAAGAAACAATACAAGAACAACAATGGTGGTGGTGGAGGGTGTTCAAGCAACAGCACAGTGGAAGAGAATAACGAGAAGAAGAGTTCATCAACATCAGTAAGACCTTACGTTAGATCCAAGTTGCCAAGGTTGCGTTGGACCCCTGATCTTCATCTTCGATTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTAGAGGACACAAATCATCAAGTAGTAATGGCTGATCATCATAGGCTTCTAATAGAAAATGGAGAGAGAAATAATGTTTATAATCTCAGCCAGCTTCCCATGCTTCAAAGTTATAGATATGGTCATGGATATGGAGTTGCTTCCGCTACTCTTGGTGTCTATGAAAACATGGCGCATAGGAACGCCAATTTGACTCATCATCATAGCATTTTTTCTCATAATTTTGGGGAACAATCATCAAGCCATCCTCATCCTCCTCATCATCATCATCATCATGAACAAAAAGATCATCAGTTTCTATCATTTGGAAATGGCCAAGGATCTTTATGCACGAATACTAATAACAATAGATTAATAAGCAGTCACATTGAAAAGCCTAGAGCTCAAGATTTCATGCCTACTAATACTAATAATAATTTGAAAAGAAAGGCTTCAGAAAATAGTGATATTGATTTGGACTTGTCTCTTAAATTAAATTCAAGGGTGGTTTTTAATGATGAGAAGCAATTAGGAAGAAGAAGCAGCATGATGATGATGATGATGATGGAGGAAGAAGAACACCATGAAGTTGTAGTTAATAGCAATCTATCACTCTCTTTGCACTCTCATCAATCCTCATCACCACAAGATCATTGTAATAAGGTGAAAGGTAAAAAGGCCACTACAAATTTGGATCTAAGAATCTGA 1149 0.369 MMMMMKMVEEESHGSECSKTRSPCNDDNNNNEDDGYCEEESETNNEEEVEEEDESSYKKQYKNNNGGGGGCSSNSTVEENNEKKSSSTSVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVEDTNHQVVMADHHRLLIENGERNNVYNLSQLPMLQSYRYGHGYGVASATLGVYENMAHRNANLTHHHSIFSHNFGEQSSSHPHPPHHHHHHEQKDHQFLSFGNGQGSLCTNTNNNRLISSHIEKPRAQDFMPTNTNNNLKRKASENSDIDLDLSLKLNSRVVFNDEKQLGRRSSMMMMMMMEEEEHHEVVVNSNLSLSLHSHQSSSPQDHCNKVKGKKATTNLDLRI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01900 382 Pfam Myb-like DNA-binding domain 101 151 IPR001005 -
Adu04g01900 382 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 154 IPR006447 GO:0003677
Adu04g01900 382 MobiDBLite consensus disorder prediction 60 91 - -
Adu04g01900 382 MobiDBLite consensus disorder prediction 366 382 - -
Adu04g01900 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 155 IPR017930 -
Adu04g01900 382 MobiDBLite consensus disorder prediction 354 382 - -
Adu04g01900 382 Gene3D - 98 155 - -
Adu04g01900 382 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 292 379 IPR044848 GO:0003700
Adu04g01900 382 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 13 211 IPR044848 GO:0003700
Adu04g01900 382 MobiDBLite consensus disorder prediction 227 261 - -
Adu04g01900 382 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Adu04g01900 382 MobiDBLite consensus disorder prediction 277 296 - -
Adu04g01900 382 MobiDBLite consensus disorder prediction 1 91 - -
Adu04g01900 382 MobiDBLite consensus disorder prediction 31 53 - -
Adu04g01900 382 PANTHER - 13 211 - -
Adu04g01900 382 PANTHER - 292 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01900 Adu-Chr4 95020050 95021990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01900 69 160 G2-like Transcription Factor Family AT2G42660 62.857 3.56e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu04g01900 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01900 - - adu:107484994 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01900 04 95020050 95021990 Adu04g01900 04 95020050 95021990 ECH