Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01893 ATGGCGAGCGCATACCAAGAGCAACTACCGGCATCACCAGACTGGCTAAACAAAGGCGACAACGCATGGCAGATGACGGCGGCGACACTCGTCGGCCTCCAAAGCATGCCGGGACTGGTTATACTCTACGCAAGCATAGTAAAGAAGAAATGGGCTGTCAATTCGGCTTTCATGGCTCTCTATGCTTTTGCAGCGGTTCTAATATGTTGGGTCCTTGTGTGCTATCGCATGGCCTTCGGTGACCAGCTTCTTCCATTTTGGGGGAAAGGAGCACCAGCACTAGGTCAAAAGTACCTAATAGGACAAGCCAAGGTTCCTGAAACCGCTCATTATTACAAAAATGGTAAACTTGAGAAGGCTATGGAGACACCCTTTTTCCCTATGGCTTCCATTGTGTATTTTCAGTTCACTTTTGCGGCAATAACAATGATCTTGCTGGCTGGTTCTGTTCTTGGGCGCATGAACATCAAGGCTTGGATGGCTTTTGTGCCTCTTTGGCTCATATTTTCTTACACTGTTGGTGCTTTCAGCCTCTGGGGTGGTGGCTTTCTTTATCACTGGGGTGTTATTGATTACTCAGGTGGCTATGTTATTCATCTTTCATCTGGAATTGCTGGATTCACTGCTGCTTATTGGGTTGGGCCAAGGCTGAAGAGTGATAGAGAAAGGTTCCCGCCAAACAACGTGCTACTTATGCTTGCGGGAGCAGGGTTGCTGTGGATGGGGTGGTCAGGGTTCAATGGAGGTGCACCGTACGCCGCAAACACAGCGTCGTCGATTGCTGTGTTGAACACTAACATCTGTGCGGCCACTAGCCTCCTTGTGTGGACCTCTCTTGATGTTTCTTTCTTTGGGAAGCCCTCTGTCGTTGGCGCTGTTCAGGGTATGATGACTGGACTTGTGTGCATCACTCCTGGTGCAGGGCTTGTGCAATCGTGGGCGGCTATAGTGATGGGAATGCTATCTGGAAGCATTCCGTGGGTCTCAATGATGATTCTTCACAAAAAGTCAAGCCTCCTTCAGAAGGTAGATGACACCCTAGGTGTATTTCATACACATGCAGTAGCTGGCCTATTGGGTGGGCTTCTCACAGGTCTCTTCGCAGAACCAACACTTTGCAACCTGCTACTACCGGTAACCAATTCAAGAGGTGCATTCTATGGTGGTAGTGGTGGTGTTCAGTTCCTAAAACAATTGGTTGCAGCATTGTTCGTAATTGGTTGGAACTTGGTCTCAACCACCATAATTCTTCTCGTCATCCAATTGTTCATACCTTTGAGGATGCCTGATGAGCAACTTGAGATTGGTGATGATGCTGTTCATGGTGAAGAAGCTTATGCACTTTGGGGTGATGGTGAAAAATATGATCCTACAAGGCATGGGACACAAAATAATAATGGCAATTCTTCTGTTTCACCTTATGTTAGTGGTGCAAGAGGTGTCACCATCAATTTGTGA 1458 0.4753 MASAYQEQLPASPDWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLIGQAKVPETAHYYKNGKLEKAMETPFFPMASIVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANTASSIAVLNTNICAATSLLVWTSLDVSFFGKPSVVGAVQGMMTGLVCITPGAGLVQSWAAIVMGMLSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPTLCNLLLPVTNSRGAFYGGSGGVQFLKQLVAALFVIGWNLVSTTIILLVIQLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGTQNNNGNSSVSPYVSGARGVTINL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01893 485 TIGRFAM amt: ammonium transporter 20 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Adu04g01893 485 ProSitePatterns Ammonium transporters signature. 191 216 IPR018047 GO:0008519|GO:0016020|GO:0072488
Adu04g01893 485 PRINTS Rhesus blood group protein signature 135 151 IPR002229 GO:0005887
Adu04g01893 485 PRINTS Rhesus blood group protein signature 230 248 IPR002229 GO:0005887
Adu04g01893 485 PRINTS Rhesus blood group protein signature 261 283 IPR002229 GO:0005887
Adu04g01893 485 PRINTS Rhesus blood group protein signature 316 334 IPR002229 GO:0005887
Adu04g01893 485 PANTHER AMMONIUM TRANSPORTER MEP2 3 482 IPR001905 GO:0008519|GO:0016020|GO:0072488
Adu04g01893 485 Gene3D Ammonium transporter AmtB like domains 2 449 IPR029020 -
Adu04g01893 485 Pfam Ammonium Transporter Family 22 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Adu04g01893 485 PANTHER AMMONIUM TRANSPORTER 3 482 - -
Adu04g01893 485 SUPERFAMILY Ammonium transporter 15 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01893 Adu-Chr4 94966923 94972147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01893 128 485 Inorganic Solute Cotransporters AT2G38290 77.716 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01893 K03320 - gmx:100790119 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01893 04 94966923 94972147 Adu04g01893 04 94966923 94972147 ECH